RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RGS16O15492 202 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 TOM1L1O75674 476 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 ASS1P00966 412 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 AGTP01019 485 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 SSTR3P32745 418 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 TNFSF9P41273 254 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 KLF1Q13351 362 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 ZNF568Q3ZCX4 644 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 IER5Q5VY09 327 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 CDCA2Q69YH5 1023 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 RHBDF2Q6PJF5 856 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 TADA2BQ86TJ2 420 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 KATNAL2Q8IYT4 538 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 RAPGEF5Q92565 580 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 CENPTQ96BT3 561 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 SNF8Q96H20 258 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 AZI2Q9H6S1 392 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 RRAGCQ9HB90 399 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 HOMER3Q9NSC5 361 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 ASIC3Q9UHC3 531 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 TLDC2A0PJX2 215 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 GAS8O95995 478 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 TAS2R40P59535 323 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 SLC20A2Q08357 652 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 LY6KQ17RY6 165 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 DAB2IPQ5VWQ8 1189 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 GADL1Q6ZQY3 521 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 CCDC50Q8IVM0 306 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 ATL2Q8NHH9 583 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 FEZF2Q8TBJ5 459 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 TCP11Q8WWU5 503 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 BBXQ8WY36 941 aaPredicted RBP19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 PARVAQ9NVD7 372 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 CSADQ9Y600 493 aa19.11■□□□□ 0.65
PDLIM7-207ENST00000486828 O00370 1275 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 TLR3O15455 904 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 MEFVO15553 781 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 GAS2O43903 313 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 CST3P01034 146 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 RALAP11233 206 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 IVDP26440 423 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 PPARDQ03181 441 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 SCARA3Q6AZY7 606 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 YTHDF3Q7Z739 585 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 ZBTB33Q86T24 672 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 ZNF606Q8WXB4 792 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 ACO2Q99798 780 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 NMRK2Q9NPI5 230 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 AAASQ9NRG9 546 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 R3HDM2Q9Y2K5 976 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 POLR2AP24928 1970 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 OGTO15294 1046 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 KIAA0754O94854 1291 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 CPP00450 1065 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 MMP8P22894 467 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 MMP13P45452 471 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 MXD4Q14582 209 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 EEPD1Q7L9B9 569 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 CCDC25Q86WR0 208 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 EXD1Q8NHP7 514 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 TCHPQ9BT92 498 aa19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 ROPN1BQ9BZX4 212 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 STMN4Q9H169 189 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 ROPN1Q9HAT0 212 aaPredicted RBP19.1■□□□□ 0.65
PDLIM7-207ENST00000486828 OTOFQ9HC10 1997 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 SMIM23A6NLE4 172 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 LGR5O75473 907 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 PRKCBP05771 671 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 IRX3P78415 501 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 CAV1Q03135 178 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 MCL1Q07820 350 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 LAMTOR4Q0VGL1 99 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 MKRN4PQ13434 485 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 CCNG2Q16589 344 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 EAPPQ56P03 285 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 TNFAIP8L3Q5GJ75 292 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 ERMARDQ5T6L9 678 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 DLK2Q6UY11 383 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 PNMA8AQ86V59 439 aaPredicted RBP19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 ZBTB8OSQ8IWT0 167 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 EXOC8Q8IYI6 725 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 UHMK1Q8TAS1 419 aaKnown RBP19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 EPS8L3Q8TE67 593 aaKnown RBP19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 IPO4Q8TEX9 1081 aaKnown RBP19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 CCDC114Q96M63 670 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 GPR20Q99678 358 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 HEMGNQ9BXL5 484 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 OSBPL8Q9BZF1 889 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 MTMR12Q9C0I1 747 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 CDC42EP4Q9H3Q1 356 aaKnown RBP19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 IP6K2Q9UHH9 426 aa19.09■□□□□ 0.65
PDLIM7-207ENST00000486828 IGKV6-21A0A0C4DH24 114 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 C5orf60A6NFR6 353 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 ABLIM1O14639 778 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 RASGRF2O14827 1237 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 CNMDO75829 334 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 ARIH2O95376 493 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 LSM8O95777 96 aaKnown RBP19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 ATF2P15336 505 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 IFI35P80217 286 aaPredicted RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms