RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 PNMA5Q96PV4 448 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 LACRTQ9GZZ8 138 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 IGFLR1Q9H665 355 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 METTL14Q9HCE5 456 aaKnown RBP9.71□□□□□ -0.86
COL12A1-208ENST00000486533 AAASQ9NRG9 546 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 FAM207AQ9NSI2 230 aaPredicted RBP9.71□□□□□ -0.86
COL12A1-208ENST00000486533 PCDHA12Q9UN75 941 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.71□□□□□ -0.86
COL12A1-208ENST00000486533 PLXNA4Q9HCM2 1894 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 TULP1O00294 542 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-208ENST00000486533 HOXA2O43364 376 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 NCK2O43639 380 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 DKC1O60832 514 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL12A1-208ENST00000486533 GFPT2O94808 682 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 STBD1O95210 358 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 DNAJB1P25685 340 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 RPL13P26373 211 aaKnown RBP9.7□□□□□ -0.86
COL12A1-208ENST00000486533 EHHADHQ08426 723 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 HYAL1Q12794 435 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 DSC3Q14574 896 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
COL12A1-208ENST00000486533 LRRC55Q6ZSA7 311 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 ANO5Q75V66 913 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 SRLQ86TD4 932 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 RHPN2Q8IUC4 686 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 THNSL1Q8IYQ7 743 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 ANKK1Q8NFD2 765 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 SPPL3Q8TCT6 385 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 NEK9Q8TD19 979 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 MICAL1Q8TDZ2 1067 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 WHAMMQ8TF30 809 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 POF1BQ8WVV4 589 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 SLC7A3Q8WY07 619 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 NLRP4Q96MN2 994 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 JPH2Q9BR39 696 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-208ENST00000486533 GCOM2Q9BZD3 368 aaPredicted RBP9.7□□□□□ -0.86
COL12A1-208ENST00000486533 ELAC1Q9H777 363 aaKnown RBP9.7□□□□□ -0.86
COL12A1-208ENST00000486533 CYP26B1Q9NR63 512 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 TYW1Q9NV66 732 aaKnown RBP9.7□□□□□ -0.86
COL12A1-208ENST00000486533 ARHGAP20Q9P2F6 1191 aa9.7□□□□□ -0.86
COL12A1-208ENST00000486533 RRP15Q9Y3B9 282 aaKnown RBP9.7□□□□□ -0.86
COL12A1-208ENST00000486533 GRXCR2A6NFK2 248 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 SLC16A3O15427 465 aaKnown RBP9.69□□□□□ -0.86
COL12A1-208ENST00000486533 MAFO75444 373 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-208ENST00000486533 MOCS3O95396 460 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 P4HBP07237 508 aaKnown RBP9.69□□□□□ -0.86
COL12A1-208ENST00000486533 CCDC172P0C7W6 258 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 SSTR3P32745 418 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-208ENST00000486533 POLGP54098 1239 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-208ENST00000486533 NPEPPSP55786 919 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 FAM189BP81408 668 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 CDC42EP1Q00587 391 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 CYP27A1Q02318 531 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 C2orf54Q08AI8 447 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 CAMK1Q14012 370 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 PPP2R5EQ16537 467 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 DNAJC21Q5F1R6 531 aaKnown RBP9.69□□□□□ -0.86
COL12A1-208ENST00000486533 STXBP4Q6ZWJ1 553 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 DYMQ7RTS9 669 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 FRMD5Q7Z6J6 570 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 CREG2Q8IUH2 290 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 ZC3H3Q8IXZ2 948 aaKnown RBP9.69□□□□□ -0.86
COL12A1-208ENST00000486533 SYCE1Q8N0S2 351 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 C1orf131Q8NDD1 294 aaKnown RBP9.69□□□□□ -0.86
COL12A1-208ENST00000486533 BAP1Q92560 729 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 HAS1Q92839 578 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 PBKQ96KB5 322 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 CEP170P1Q96L14 293 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 CEP89Q96ST8 783 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 LXNQ9BS40 222 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 LSM14BQ9BX40 385 aaKnown RBP9.69□□□□□ -0.86
COL12A1-208ENST00000486533 TMEM117Q9H0C3 514 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 PLCB1Q9NQ66 1216 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 SUCLA2Q9P2R7 463 aaPredicted RBP9.69□□□□□ -0.86
COL12A1-208ENST00000486533 FAM50BQ9Y247 325 aa9.69□□□□□ -0.86
COL12A1-208ENST00000486533 TRIOO75962 3097 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 UBE4BO95155 1302 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 A0A087WZ62 844 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 IGKV6-21A0A0C4DH24 114 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 GOLGA6L10A6NI86 522 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 SHOX2O60902 331 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 FGF18O76093 207 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 PRPF6O94906 941 aaKnown RBP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 PLA2G4BP0C869 781 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 GAP43P17677 238 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 LAG3P18627 525 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 YWHABP31946 246 aaKnown RBP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 IRS1P35568 1242 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 NDUFV1P49821 464 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 KLK7P49862 253 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 CDR1P51861 262 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 CYP4A11Q02928 519 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 DLX2Q07687 328 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 KLHL30Q0D2K2 578 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 COL19A1Q14993 1142 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 NAB2Q15742 525 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 SLC18A3Q16572 532 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 ZCWPW2Q504Y3 356 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 TWF2Q6IBS0 349 aaKnown RBP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 MICALCLQ6ZW33 695 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms