RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 RSAD2Q8WXG1 361 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 SECISBP2LQ93073 1101 aaKnown RBP7.55□□□□□ -1.2
SMC4-217ENST00000485867 GAL3ST3Q96A11 431 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 ELMO3Q96BJ8 720 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 BORCS6Q96GS4 357 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 ADAM2Q99965 735 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 SENP7Q9BQF6 1050 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 TMEM117Q9H0C3 514 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 ATP6V0A4Q9HBG4 840 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 VAT1LQ9HCJ6 419 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 PARD6AQ9NPB6 346 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 RGS18Q9NS28 235 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 ZBTB40Q9NUA8 1239 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 RNF19AQ9NV58 838 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 TMEM161AQ9NX61 479 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 ERAP1Q9NZ08 941 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 SPG21Q9NZD8 308 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 USP18Q9UMW8 372 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 MAPK8IP1Q9UQF2 711 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 SIT1Q9Y3P8 196 aa7.55□□□□□ -1.2
SMC4-217ENST00000485867 SETXQ7Z333 2677 aaKnown RBP7.55□□□□□ -1.2
SMC4-217ENST00000485867 MTCL1Q9Y4B5 1905 aaKnown RBP7.54□□□□□ -1.2
SMC4-217ENST00000485867 COL4A3Q01955 1670 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.54□□□□□ -1.2
SMC4-217ENST00000485867 GSTTP1A0A1W2PQM5 241 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 DENND3A2RUS2 1198 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 RRN3P2A6NIE6 340 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 GCOM1H8Y6P7 765 aaPredicted RBP7.54□□□□□ -1.2
SMC4-217ENST00000485867 SLC30A4O14863 429 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 N4BP1O75113 896 aaKnown RBP7.54□□□□□ -1.2
SMC4-217ENST00000485867 SLITRK5O94991 958 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 P4HBP07237 508 aaKnown RBP7.54□□□□□ -1.2
SMC4-217ENST00000485867 POLR2MP0CAP2 368 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 SRFP11831 508 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 INSRRP14616 1297 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 CA8P35219 290 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 CLCN7P51798 805 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 FAM189BP81408 668 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 IKZF1Q13422 519 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 FAM43BQ6ZT52 329 aaPredicted RBP7.54□□□□□ -1.2
SMC4-217ENST00000485867 CABP7Q86V35 215 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 DGKHQ86XP1 1220 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 TBC1D10CQ8IV04 446 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 LRRC43Q8N309 656 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 PJA1Q8NG27 643 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 ZNF507Q8TCN5 953 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 AUTS2Q8WXX7 1259 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 GLG1Q92896 1179 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 MTMR8Q96EF0 704 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 CASD1Q96PB1 797 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 FOXQ1Q9C009 403 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 ZBP1Q9H171 429 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 EPC1Q9H2F5 836 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 ELAC1Q9H777 363 aaKnown RBP7.54□□□□□ -1.2
SMC4-217ENST00000485867 SFXN1Q9H9B4 322 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 FBRSQ9HAH7 460 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 ARHGEF3Q9NR81 526 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 FBXO4Q9UKT5 387 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 ANGPTL2Q9UKU9 493 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 NOC2LQ9Y3T9 749 aaKnown RBP7.54□□□□□ -1.2
SMC4-217ENST00000485867 PCDHGA2Q9Y5H1 932 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 PCDHA2Q9Y5H9 948 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 FRYQ5TBA9 3013 aa7.54□□□□□ -1.2
SMC4-217ENST00000485867 ZMYM6O95789 1325 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 MYH9P35579 1960 aaKnown RBP7.53□□□□□ -1.2
SMC4-217ENST00000485867 FLNBO75369 2602 aaKnown RBP7.53□□□□□ -1.2
SMC4-217ENST00000485867 LRRN2O75325 713 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 RPS6KA5O75582 802 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 CXCL14O95715 111 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 FGAP02671 866 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 PARP1P09874 1014 aaKnown RBP7.53□□□□□ -1.2
SMC4-217ENST00000485867 PCP11498 1178 aaKnown RBP7.53□□□□□ -1.2
SMC4-217ENST00000485867 PMLP29590 882 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 HAND2P61296 217 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 SLBPQ14493 270 aaKnown RBP eCLIP7.53□□□□□ -1.2
SMC4-217ENST00000485867 NONOQ15233 471 aaKnown RBP eCLIP7.53□□□□□ -1.26e-8■□□□□ 8.6
SMC4-217ENST00000485867 LETM2Q2VYF4 491 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 SV2BQ7L1I2 683 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 SLC44A3Q8N4M1 653 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 ZBTB44Q8NCP5 570 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 TRAPPC12Q8WVT3 735 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 SEPT1Q8WYJ6 367 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 PLPPR2Q96GM1 343 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 SMARCAD1Q9H4L7 1026 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 KAT14Q9H8E8 782 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 RTEL1Q9NZ71 1219 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 ST3GAL5Q9UNP4 418 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 IRAK3Q9Y616 596 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 F5P12259 2224 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 SDK1Q7Z5N4 2213 aa7.53□□□□□ -1.2
SMC4-217ENST00000485867 NEDD4P46934 1319 aa7.52□□□□□ -1.2
SMC4-217ENST00000485867 GREB1Q4ZG55 1949 aa7.52□□□□□ -1.2
SMC4-217ENST00000485867 WDR81Q562E7 1941 aa7.52□□□□□ -1.2
SMC4-217ENST00000485867 SPAG17Q6Q759 2223 aa7.52□□□□□ -1.2
SMC4-217ENST00000485867 SMIM35A0A1B0GVV1 85 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 PRAMEF27A3QJZ7 478 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 ZBTB5O15062 677 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 LAMTOR5O43504 91 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 TBC1D4O60343 1298 aa7.52□□□□□ -1.21
SMC4-217ENST00000485867 KCNA2P16389 499 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms