RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 BLOC1S1P78537 153 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 ABHD17BQ5VST6 288 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 EFCAB2Q5VUJ9 269 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 PPP4R3AQ6IN85 833 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 SUPT20HQ8NEM7 779 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 NLGN4YQ8NFZ3 816 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 NUP133Q8WUM0 1156 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 ASB10Q8WXI3 467 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 COA7Q96BR5 231 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 SMAD5Q99717 465 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 ALOXE3Q9BYJ1 711 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 GSTO2Q9H4Y5 243 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 SYBUQ9NX95 663 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 RNF181Q9P0P0 153 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 USP25Q9UHP3 1055 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 KCNE5Q9UJ90 142 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 NOX1Q9Y5S8 564 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 SETD1AO15047 1707 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 SRCAPQ6ZRS2 3230 aa6.1□□□□□ -1.43
SMARCC1-207ENST00000485833 AATKQ6ZMQ8 1374 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 CCDC78A2IDD5 438 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 HAUS5O94927 633 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 GPANK1O95872 356 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 EGR2P11161 476 aaPredicted RBP6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 TGM1P22735 817 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 ADKP55263 362 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 CXADRP78310 365 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 HSD11B2P80365 405 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 IL10RAQ13651 578 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 RAB39AQ14964 217 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 PTPROQ16827 1216 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 UAP1L1Q3KQV9 507 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 CMTR2Q8IYT2 770 aaKnown RBP6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 FAM43AQ8N2R8 423 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 RNF31Q96EP0 1072 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 COQ10AQ96MF6 247 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 BRINP2Q9C0B6 783 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 SERPINB13Q9UIV8 391 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 SPEF1Q9Y4P9 236 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 CAMSAP1Q5T5Y3 1602 aa6.09□□□□□ -1.43
SMARCC1-207ENST00000485833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.09□□□□□ -1.44
SMARCC1-207ENST00000485833 SETD1BQ9UPS6 1966 aaKnown RBP6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 RAPGEF6Q8TEU7 1601 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 HKR1P10072 659 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 ITGAMP11215 1152 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 MTHFD1P11586 935 aaKnown RBP6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 SLC6A4P31645 630 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 NOMO3P69849 1222 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 SCAPQ12770 1279 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 ODF1Q14990 250 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 PABPC1LQ4VXU2 614 aaKnown RBP6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 NOMO2Q5JPE7 1267 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 FOXR2Q6PJQ5 311 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 TBC1D15Q8TC07 691 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 KAT5Q92993 513 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 FUBP1Q96AE4 644 aaKnown RBP6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 BOD1Q96IK1 185 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 MRGPRX4Q96LA9 322 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 PNKPQ96T60 521 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 GALNT9Q9HCQ5 603 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 HOMER2Q9NSB8 354 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 TMEM74BQ9NUR3 256 aa6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 NUP153P49790 1475 aaKnown RBP6.08□□□□□ -1.44
SMARCC1-207ENST00000485833 GRM6O15303 877 aa6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 LMNAP02545 664 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 RPLP2P05387 115 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 CCND1P24385 295 aa6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 TLE1Q04724 770 aa6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 SLFN5Q08AF3 891 aa6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 GPR150Q8NGU9 434 aa6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 CAVIN3Q969G5 261 aa6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 MARS2Q96GW9 593 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 CALCOCO1Q9P1Z2 691 aa6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 RGS17Q9UGC6 210 aaPredicted RBP6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 MTO1Q9Y2Z2 717 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 CFAP20Q9Y6A4 193 aaKnown RBP6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 C9orf84Q5VXU9 1444 aa6.07□□□□□ -1.44
SMARCC1-207ENST00000485833 ZRANB2O95218 330 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 CD1AP06126 327 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 SBK3P0C264 359 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 FCER1AP12319 257 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 FDXRP22570 491 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 SEC24CP53992 1094 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 ZNF280AP59817 542 aaPredicted RBP6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 CYP2A13Q16696 494 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 GADL1Q6ZQY3 521 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 GPR149Q86SP6 731 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 NSUN6Q8TEA1 469 aaKnown RBP6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 ZG16BQ96DA0 208 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 CLPTM1LQ96KA5 538 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 MED15Q96RN5 788 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 PACSIN1Q9BY11 444 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 HSFX1Q9UBD0 423 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 TESQ9UGI8 421 aaKnown RBP6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 PCDHB1Q9Y5F3 818 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 EPN1Q9Y6I3 576 aaPredicted RBP6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 GOLGA3Q08378 1498 aa6.06□□□□□ -1.44
SMARCC1-207ENST00000485833 ABCA6Q8N139 1617 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms