RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 UNC45BQ8IWX7 931 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 LRRC43Q8N309 656 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 DCLK2Q8N568 766 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 TMEM57Q8N5G2 664 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 ZBTB34Q8NCN2 500 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 OR52K2Q8NGK3 314 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 FBXO30Q8TB52 745 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 SSH3Q8TE77 659 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 UCMAQ8WVF2 138 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 CHAMP1Q96JM3 812 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 CCDC43Q96MW1 224 aaKnown RBP4.95□□□□□ -1.62
RTN4-213ENST00000485749 NT5C1BQ96P26 610 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 ASB2Q96Q27 587 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 LRRCC1Q9C099 1032 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 SLC7A5P2Q9GIP4 190 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 NUP62CLQ9H1M0 184 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 DUSP15Q9H1R2 295 aaPredicted RBP4.95□□□□□ -1.62
RTN4-213ENST00000485749 ZCCHC4Q9H5U6 513 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 RASAL2Q9UJF2 1139 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 MOSPD1Q9UJG1 213 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 GJD2Q9UKL4 321 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 CNOT6Q9ULM6 557 aaKnown RBP4.95□□□□□ -1.62
RTN4-213ENST00000485749 L1RE1Q9UN81 338 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 X6R8D5 127 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 AKNAQ7Z591 1439 aa4.95□□□□□ -1.62
RTN4-213ENST00000485749 SSU72P8A0A1W2PR75 194 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 WTIPA6NIX2 430 aaPredicted RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 EYA2O00167 538 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 ZBTB14O43829 449 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 PQBP1O60828 265 aaKnown RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 NDUFS2O75306 463 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 STARD3NLO95772 234 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 SYPP08247 313 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 PARP1P09874 1014 aaKnown RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 RHOXF2BP0C7M4 288 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 HARSP12081 509 aaKnown RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 GNAT2P19087 354 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 BTF3P20290 206 aaKnown RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 ATP5F1P24539 256 aaPredicted RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 ATP5DP30049 168 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 SDHAP31040 664 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 HADHAP40939 763 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 BUD31P41223 144 aaPredicted RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 EPS15P42566 896 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 IL12RB1P42701 662 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 ASMTP46597 345 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 SLC12A2P55011 1212 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 EGR3Q06889 387 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 AP1B1Q10567 949 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 TRDNQ13061 729 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 SCARB2Q14108 478 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 CNGA3Q16281 694 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 IMMTQ16891 758 aaKnown RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 GEN1Q17RS7 908 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 ANO4Q32M45 955 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 VWA3BQ502W6 1294 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 CCDC38Q502W7 563 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 MBLAC2Q68D91 279 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 SLC30A6Q6NXT4 461 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 FAM47EQ6ZV65 393 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 NEK10Q6ZWH5 1172 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 PDZD4Q76G19 769 aaPredicted RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 ARMC9Q7Z3E5 817 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 GRAMD1CQ8IYS0 662 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 KRT222Q8N1A0 295 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 ANKS4BQ8N8V4 417 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 PCYOX1LQ8NBM8 494 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 CCDC148Q8NFR7 591 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 CENPIQ92674 756 aaPredicted RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 BICD1Q96G01 975 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 C16orf92Q96LL3 132 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 KCNJ15Q99712 375 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 RHOXF2Q9BQY4 288 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 WDR12Q9GZL7 423 aaKnown RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 RNF32Q9H0A6 362 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 ADAMTS10Q9H324 1103 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 KCTD10Q9H3F6 313 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 EPB41L1Q9H4G0 881 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 NCOR1P1Q9H4R4 102 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 XAB2Q9HCS7 855 aaKnown RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 PARD6AQ9NPB6 346 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 MED4Q9NPJ6 270 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 KCNH7Q9NS40 1196 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 OLA1Q9NTK5 396 aaKnown RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 INTS10Q9NVR2 710 aaKnown RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 DACT1Q9NYF0 836 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 TCFL5Q9UL49 500 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 HPCAL4Q9UM19 191 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 SRPK3Q9UPE1 567 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 NOSIPQ9Y314 301 aaKnown RBP4.94□□□□□ -1.62
RTN4-213ENST00000485749 ABCC8Q09428 1581 aa4.94□□□□□ -1.62
RTN4-213ENST00000485749 ARPC4-TTLL3A0A0A6YYG9 625 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 TEX51A0A1B0GUA7 166 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 C17orf113A0A1B0GUU1 675 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 TCRBV5S4A2TA0A5A2 114 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 A8MVJ9 347 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 B4E171 279 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 MAN2B1O00754 1011 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 SLC27A2O14975 620 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 HOXC11O43248 304 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms