RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 CD52P31358 61 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 RAB27AP51159 221 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 TNNC1P63316 161 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 BFSP2Q13515 415 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 NAB2Q15742 525 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 FAM26DQ5JW98 314 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 FBXO47Q5MNV8 452 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 UBXN11Q5T124 520 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 ZNF618Q5T7W0 954 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 TAF3Q5VWG9 929 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 TMEM270Q6UE05 265 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 H2AFVQ71UI9 128 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 GLYCTKQ8IVS8 523 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 CAGE1Q8TC20 777 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 SECISBP2LQ93073 1101 aaKnown RBP10.21□□□□□ -0.77
CTSA-208ENST00000485627 ELMO3Q96BJ8 720 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 PAWRQ96IZ0 340 aaKnown RBP10.21□□□□□ -0.77
CTSA-208ENST00000485627 ALS2CR12Q96Q35 445 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 RPS6KC1Q96S38 1066 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 GDF15Q99988 308 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 CNTN3Q9P232 1028 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 NXF1Q9UBU9 619 aaKnown RBP10.21□□□□□ -0.77
CTSA-208ENST00000485627 NAGPAQ9UK23 515 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 PADI3Q9ULW8 664 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 STXBP5LQ9Y2K9 1186 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 HES2Q9Y543 173 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 PCDHB2Q9Y5E7 798 aa10.21□□□□□ -0.77
CTSA-208ENST00000485627 A0A0U1RQJ8 604 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 A0A1W2PPC1 479 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 MACROD2A1Z1Q3 448 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 DDX3XO00571 662 aaKnown RBP eCLIP10.2□□□□□ -0.78
CTSA-208ENST00000485627 PJA2O43164 708 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 ATP8B3O60423 1300 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 CYP11B1P15538 503 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 ARHGAP25P42331 645 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 CDR2Q01850 454 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 LPIN1Q14693 890 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 IFI16Q16666 785 aaKnown RBP10.2□□□□□ -0.78
CTSA-208ENST00000485627 TRIM71Q2Q1W2 868 aaKnown RBP10.2□□□□□ -0.78
CTSA-208ENST00000485627 WDR72Q3MJ13 1102 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 UMODL1Q5DID0 1318 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 SCARA5Q6ZMJ2 495 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 NOP9Q86U38 636 aaKnown RBP10.2□□□□□ -0.78
CTSA-208ENST00000485627 SLC47A2Q86VL8 602 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 ZNF677Q86XU0 584 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 TTC39CQ8N584 583 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 RNF10Q8N5U6 811 aaKnown RBP10.2□□□□□ -0.78
CTSA-208ENST00000485627 RBBP8NLQ8NC74 664 aaPredicted RBP10.2□□□□□ -0.78
CTSA-208ENST00000485627 EPS8L1Q8TE68 723 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 ATRIPQ8WXE1 791 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 PGBD4Q96DM1 585 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 HPDLQ96IR7 371 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 NOX5Q96PH1 765 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 PHF12Q96QT6 1004 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 ARID3AQ99856 593 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 LACRTQ9GZZ8 138 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 AGO3Q9H9G7 860 aaKnown RBP10.2□□□□□ -0.78
CTSA-208ENST00000485627 CYP3A43Q9HB55 503 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 ERVK-5Q9HDB9 667 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 FAM105AQ9NUU6 356 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 KLK14Q9P0G3 267 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 PUF60Q9UHX1 559 aaKnown RBP10.2□□□□□ -0.78
CTSA-208ENST00000485627 SIX4Q9UIU6 781 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 INTUQ9ULD6 942 aa10.2□□□□□ -0.78
CTSA-208ENST00000485627 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.2□□□□□ -0.78
CTSA-208ENST00000485627 CTAGE9A4FU28 777 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 TMCO5BA8MYB1 307 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 MEFVO15553 781 aaPredicted RBP10.19□□□□□ -0.78
CTSA-208ENST00000485627 STAU1O95793 577 aaKnown RBP10.19□□□□□ -0.78
CTSA-208ENST00000485627 KCNE1P15382 129 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 CD58P19256 250 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 CYP3A5P20815 502 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 ACO1P21399 889 aaKnown RBP10.19□□□□□ -0.78
CTSA-208ENST00000485627 IBSPP21815 317 aaPredicted RBP10.19□□□□□ -0.78
CTSA-208ENST00000485627 GNA15P30679 374 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 NOP2P46087 812 aaKnown RBP10.19□□□□□ -0.78
CTSA-208ENST00000485627 GUCY2FP51841 1108 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 GLRA4Q5JXX5 417 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 ALKAL1Q6UXT8 129 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.19□□□□□ -0.78
CTSA-208ENST00000485627 SLC35F6Q8N357 371 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 SMG8Q8ND04 991 aaKnown RBP10.19□□□□□ -0.78
CTSA-208ENST00000485627 TRIM58Q8NG06 486 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 LNX1Q8TBB1 728 aaPredicted RBP10.19□□□□□ -0.78
CTSA-208ENST00000485627 SLC20A1Q8WUM9 679 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 CTNNBL1Q8WYA6 563 aaPredicted RBP10.19□□□□□ -0.78
CTSA-208ENST00000485627 ZNF560Q96MR9 790 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 FAM161BQ96MY7 647 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 MMS19Q96T76 1030 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 DNAI2Q9GZS0 605 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 XYLT2Q9H1B5 865 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 VRTNQ9H8Y1 702 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 UBN1Q9NPG3 1134 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 CISHQ9NSE2 258 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 SLC38A7Q9NVC3 462 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 TRIM10Q9UDY6 481 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 TFR2Q9UP52 801 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 GIT1Q9Y2X7 761 aa10.19□□□□□ -0.78
CTSA-208ENST00000485627 VCANP13611 3396 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms