RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 CAMKK1Q8N5S9 505 aa19.78■□□□□ 0.76
DDR1-245ENST00000484556 PRIMPOLQ96LW4 560 aa19.78■□□□□ 0.76
DDR1-245ENST00000484556 UROC1Q96N76 676 aa19.78■□□□□ 0.76
DDR1-245ENST00000484556 MKNK1Q9BUB5 465 aa19.78■□□□□ 0.76
DDR1-245ENST00000484556 LRRC3Q9BY71 257 aa19.78■□□□□ 0.76
DDR1-245ENST00000484556 YIPF1Q9Y548 306 aa19.78■□□□□ 0.76
DDR1-245ENST00000484556 M0R2N6 131 aa19.77■□□□□ 0.76
DDR1-245ENST00000484556 CAPNS1P04632 268 aa19.77■□□□□ 0.76
DDR1-245ENST00000484556 LIG1P18858 919 aa19.77■□□□□ 0.76
DDR1-245ENST00000484556 SIM1P81133 766 aaPredicted RBP19.77■□□□□ 0.76
DDR1-245ENST00000484556 KARSQ15046 597 aaKnown RBP19.77■□□□□ 0.76
DDR1-245ENST00000484556 RNF20Q5VTR2 975 aa19.77■□□□□ 0.76
DDR1-245ENST00000484556 BLIDQ8IZY5 108 aa19.77■□□□□ 0.76
DDR1-245ENST00000484556 HAS1Q92839 578 aa19.77■□□□□ 0.76
DDR1-245ENST00000484556 FAM20AQ96MK3 541 aa19.77■□□□□ 0.76
DDR1-245ENST00000484556 FZD8Q9H461 694 aa19.77■□□□□ 0.76
DDR1-245ENST00000484556 SH3GLB2Q9NR46 395 aa19.77■□□□□ 0.76
DDR1-245ENST00000484556 AFF4Q9UHB7 1163 aaKnown RBP19.77■□□□□ 0.76
DDR1-245ENST00000484556 NID2Q14112 1375 aa19.77■□□□□ 0.76
DDR1-245ENST00000484556 CACNA1EQ15878 2313 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 A0A087WWV3 80 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 H7C4K7 107 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 USO1O60763 962 aaKnown RBP19.76■□□□□ 0.75
DDR1-245ENST00000484556 PRAMEF12O95522 483 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 EGFP01133 1207 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 CPB1P15086 417 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 IRX4P78413 519 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 PRPF4BQ13523 1007 aaKnown RBP19.76■□□□□ 0.75
DDR1-245ENST00000484556 ITPRIPL2Q3MIP1 535 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 TMEM196Q5HYL7 178 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 RNF19BQ6ZMZ0 732 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 BRF1Q92994 677 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 CCDC43Q96MW1 224 aaKnown RBP19.76■□□□□ 0.75
DDR1-245ENST00000484556 ADPGKQ9BRR6 497 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 CELSR3Q9NYQ7 3312 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 BPTFQ12830 3046 aa19.76■□□□□ 0.75
DDR1-245ENST00000484556 MYO16Q9Y6X6 1858 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 KIAA1549LQ6ZVL6 1849 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 PODXLO00592 558 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 SLITRK3O94933 977 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 MAPK8P45983 427 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 GRSF1Q12849 480 aaKnown RBP eCLIP19.75■□□□□ 0.751e-5■□□□□ 8.9
DDR1-245ENST00000484556 MRPL58Q14197 206 aaKnown RBP19.75■□□□□ 0.75
DDR1-245ENST00000484556 PMS2CLQ68D20 193 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 CDCA2Q69YH5 1023 aaPredicted RBP19.75■□□□□ 0.75
DDR1-245ENST00000484556 Q6ZUG5 572 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 CYP2U1Q7Z449 544 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 ZBTB8OSQ8IWT0 167 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 CHCHD4Q8N4Q1 142 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 CHFRQ96EP1 664 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 DNAJC25Q9H1X3 360 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 SLC32A1Q9H598 525 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 ANKFY1Q9P2R3 1169 aa19.75■□□□□ 0.75
DDR1-245ENST00000484556 EIF4E1BA6NMX2 242 aaKnown RBP19.74■□□□□ 0.75
DDR1-245ENST00000484556 SYN3O14994 580 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 MEFVO15553 781 aaPredicted RBP19.74■□□□□ 0.75
DDR1-245ENST00000484556 MARCH6O60337 910 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 NPY5RQ15761 445 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 FAM187BQ17R55 369 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 PPP4R3AQ6IN85 833 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 ZNF280DQ6N043 979 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 ADAM32Q8TC27 787 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 BPIFB1Q8TDL5 484 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 PGLYRP2Q96PD5 576 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 SMG9Q9H0W8 520 aaKnown RBP19.74■□□□□ 0.75
DDR1-245ENST00000484556 CRISPLD1Q9H336 500 aa19.74■□□□□ 0.75
DDR1-245ENST00000484556 NCOA5Q9HCD5 579 aaKnown RBP19.74■□□□□ 0.75
DDR1-245ENST00000484556 MAST4O15021 2626 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 PCNX2A6NKB5 2137 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 APBB3O95704 486 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 IFNAR1P17181 557 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 BCKDHBP21953 392 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 U2AF2P26368 475 aaKnown RBP eCLIP19.73■□□□□ 0.75
DDR1-245ENST00000484556 RARRES1P49788 294 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 DGKEP52429 567 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 SCAPQ12770 1279 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 GPR158Q5T848 1215 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 RPLP0P6Q8NHW5 317 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 PIGOQ8TEQ8 1089 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 TPSD1Q9BZJ3 242 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 ATXN3LQ9H3M9 355 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 FBRSL1Q9HCM7 1045 aaKnown RBP19.73■□□□□ 0.75
DDR1-245ENST00000484556 ANKEF1Q9NU02 776 aa19.73■□□□□ 0.75
DDR1-245ENST00000484556 SMIM28A0A1B0GU29 152 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 CCNT1O60563 726 aaKnown RBP19.72■□□□□ 0.75
DDR1-245ENST00000484556 VNN2O95498 520 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 PLCB2Q00722 1185 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 NAIF1Q69YI7 327 aaPredicted RBP19.72■□□□□ 0.75
DDR1-245ENST00000484556 TRIM68Q6AZZ1 485 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 GAREM2Q75VX8 874 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 KRT25Q7Z3Z0 450 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 HNRNPLLQ8WVV9 542 aaKnown RBP19.72■□□□□ 0.75
DDR1-245ENST00000484556 BSNDQ8WZ55 320 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 PIGKQ92643 395 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 EIF2AK1Q9BQI3 630 aaKnown RBP19.72■□□□□ 0.75
DDR1-245ENST00000484556 HPS4Q9NQG7 708 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 OBP2AQ9NY56 170 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 NUB1Q9Y5A7 615 aa19.72■□□□□ 0.75
DDR1-245ENST00000484556 CCDC194A0A1B0GVG4 234 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms