RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 MTERF2Q49AM1 385 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 GIMAP7Q8NHV1 300 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 FEZF2Q8TBJ5 459 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 ZKSCAN4Q969J2 545 aaPredicted RBP20.89■□□□□ 0.93
LIMS2-215ENST00000484252 WNK4Q96J92 1243 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 TCP11X1B4DZS4 312 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 MGRN1O60291 552 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 BRAFP15056 766 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 ACOT2P49753 483 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 EN1Q05925 392 aaPredicted RBP20.89■□□□□ 0.93
LIMS2-215ENST00000484252 NEDD9Q14511 834 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 SPOPLQ6IQ16 392 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 LLGL2Q6P1M3 1020 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 TMEM270Q6UE05 265 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 CRELD2Q6UXH1 353 aaPredicted RBP20.89■□□□□ 0.93
LIMS2-215ENST00000484252 GBP7Q8N8V2 638 aaPredicted RBP20.89■□□□□ 0.93
LIMS2-215ENST00000484252 RBBP8NLQ8NC74 664 aaPredicted RBP20.89■□□□□ 0.93
LIMS2-215ENST00000484252 DEPTORQ8TB45 409 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 FAM212AQ96EL1 285 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 RBM41Q96IZ5 413 aaKnown RBP20.89■□□□□ 0.93
LIMS2-215ENST00000484252 APOBEC3GQ9HC16 384 aaKnown RBP20.89■□□□□ 0.93
LIMS2-215ENST00000484252 CD248Q9HCU0 757 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 KCNK9Q9NPC2 374 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 O00370 1275 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 TLR3O15455 904 aaKnown RBP20.88■□□□□ 0.93
LIMS2-215ENST00000484252 KCNA3P22001 575 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 KLRC2P26717 231 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 LRRC14Q15048 493 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 HIBCHQ6NVY1 386 aaPredicted RBP20.88■□□□□ 0.93
LIMS2-215ENST00000484252 ARHGEF18Q6ZSZ5 1173 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 RCOR2Q8IZ40 523 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 ZCCHC9Q8N567 271 aaKnown RBP20.88■□□□□ 0.93
LIMS2-215ENST00000484252 CCDC63Q8NA47 563 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 MGARPQ8TDB4 240 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 FAM84AQ96KN4 292 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 PORCNQ9H237 461 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 ADAMTS5Q9UNA0 930 aa20.88■□□□□ 0.93
LIMS2-215ENST00000484252 SCAF8Q9UPN6 1271 aaKnown RBP20.88■□□□□ 0.93
LIMS2-215ENST00000484252 DPEP1P16444 411 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 VPS41P49754 854 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 WNT7BP56706 349 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 C2CD6Q53TS8 623 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 DRICH1Q6PGQ1 229 aaPredicted RBP20.87■□□□□ 0.93
LIMS2-215ENST00000484252 PASD1Q8IV76 773 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 PDGFDQ9GZP0 370 aaPredicted RBP20.87■□□□□ 0.93
LIMS2-215ENST00000484252 DNAJC17Q9NVM6 304 aaKnown RBP20.87■□□□□ 0.93
LIMS2-215ENST00000484252 CTNNAL1Q9UBT7 734 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 PTPRJQ12913 1337 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 K7ERI5 159 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 ATP2A1O14983 1001 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 SP4Q02446 784 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 PPP1R21Q6ZMI0 780 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 GSTA5Q7RTV2 222 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 C12orf42Q96LP6 360 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 MSTO1Q9BUK6 570 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 DHX33Q9H6R0 707 aaKnown RBP20.87■□□□□ 0.93
LIMS2-215ENST00000484252 FGFR1OP2Q9NVK5 253 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 CYP39A1Q9NYL5 469 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 NKIRAS1Q9NYS0 192 aa20.87■□□□□ 0.93
LIMS2-215ENST00000484252 ZNF214Q9UL59 606 aaPredicted RBP20.87■□□□□ 0.93
LIMS2-215ENST00000484252 TPX2Q9ULW0 747 aaKnown RBP20.87■□□□□ 0.93
LIMS2-215ENST00000484252 A0A0B4J269 797 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 NDC80O14777 642 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 CREB1P16220 341 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 SLC8A1P32418 973 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 ARL2P36404 184 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 SSR1P43307 286 aaKnown RBP20.86■□□□□ 0.93
LIMS2-215ENST00000484252 NOP14P78316 857 aaKnown RBP20.86■□□□□ 0.93
LIMS2-215ENST00000484252 ELF3P78545 371 aaPredicted RBP20.86■□□□□ 0.93
LIMS2-215ENST00000484252 MCL1Q07820 350 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 NFX1Q12986 1120 aaKnown RBP20.86■□□□□ 0.93
LIMS2-215ENST00000484252 NR1H3Q13133 447 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 LRRC38Q5VT99 294 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 DCAF15Q66K64 600 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 SCYL3Q8IZE3 742 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 ANKRD42Q8N9B4 389 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 ZNF280CQ8ND82 737 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 ACAD9Q9H845 621 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 NAALADL1Q9UQQ1 740 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 USTQ9Y2C2 406 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 TELO2Q9Y4R8 837 aa20.86■□□□□ 0.93
LIMS2-215ENST00000484252 MAFBQ9Y5Q3 323 aaPredicted RBP20.86■□□□□ 0.93
LIMS2-215ENST00000484252 OATP04181 439 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 CFHP08603 1231 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 CD58P19256 250 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 GLRA2P23416 452 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 AP3M2P53677 418 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 PREPLQ4J6C6 727 aaPredicted RBP20.85■□□□□ 0.93
LIMS2-215ENST00000484252 DAB2IPQ5VWQ8 1189 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 NUGGCQ68CJ6 796 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 ANKRD35Q8N283 1001 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 ASAP3Q8TDY4 903 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 TMEM143Q96AN5 459 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 MAGEB18Q96M61 343 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 CFAP57Q96MR6 1250 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 TTC25Q96NG3 672 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 HAPLN2Q9GZV7 340 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 TMEM134Q9H6X4 195 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 ZNF302Q9NR11 478 aa20.85■□□□□ 0.93
LIMS2-215ENST00000484252 ARL2BPQ9Y2Y0 163 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms