RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 PDCD11Q14690 1871 aaKnown RBP10.28□□□□□ -0.76
UFD1-208ENST00000484101 SMIM35A0A1B0GVV1 85 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 TFRCP02786 760 aaKnown RBP10.28□□□□□ -0.76
UFD1-208ENST00000484101 EDN1P05305 212 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 PAEPP09466 180 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 GNAT1P11488 350 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 SMPD1P17405 629 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 CTNNA1P35221 906 aaKnown RBP10.28□□□□□ -0.76
UFD1-208ENST00000484101 PTP4A2Q12974 167 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
UFD1-208ENST00000484101 DHX34Q14147 1143 aaKnown RBP10.28□□□□□ -0.76
UFD1-208ENST00000484101 CASP8Q14790 479 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 TMEM270Q6UE05 265 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 MON1BQ7L1V2 547 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 ZBTB33Q86T24 672 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 PALB2Q86YC2 1186 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 MCOLN2Q8IZK6 566 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 WHAMMQ8TF30 809 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 AENQ8WTP8 325 aaKnown RBP10.28□□□□□ -0.76
UFD1-208ENST00000484101 NLRP7Q8WX94 980 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 ARHGEF26Q96DR7 871 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 RNPC3Q96LT9 517 aaKnown RBP10.28□□□□□ -0.76
UFD1-208ENST00000484101 SCLT1Q96NL6 688 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 PCDHB18PQ96TA0 734 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 PSMB7Q99436 277 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 PTPN18Q99952 460 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 PI4K2AQ9BTU6 479 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 GCOM2Q9BZD3 368 aaPredicted RBP10.28□□□□□ -0.76
UFD1-208ENST00000484101 UBXN6Q9BZV1 441 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 MTMR12Q9C0I1 747 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 MIS12Q9H081 205 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 RAB17Q9H0T7 212 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 PDZD7Q9H5P4 517 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 APOBEC3GQ9HC16 384 aaKnown RBP10.28□□□□□ -0.76
UFD1-208ENST00000484101 ZFYVE28Q9HCC9 887 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 GDF3Q9NR23 364 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 MTMR10Q9NXD2 777 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 CNOT8Q9UFF9 292 aaKnown RBP10.28□□□□□ -0.76
UFD1-208ENST00000484101 RASAL2Q9UJF2 1139 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 ITGA11Q9UKX5 1188 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 MTUS1Q9ULD2 1270 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 STRIP2Q9ULQ0 834 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 PCDHGC3Q9UN70 934 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 ALG6Q9Y672 507 aa10.28□□□□□ -0.76
UFD1-208ENST00000484101 MBLAC1A4D2B0 266 aaPredicted RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 FAM187AA6NFU0 413 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 KRIT1O00522 736 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 DDX3YO15523 660 aaKnown RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 PSTPIP1O43586 416 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 SPOPO43791 374 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 SEC31AO94979 1220 aaKnown RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 HEXIM1O94992 359 aaKnown RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 ZNF286BP0CG31 522 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 EIF4BP23588 611 aaKnown RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 CDH5P33151 784 aaPredicted RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 AARSP49588 968 aaKnown RBP eCLIP10.27□□□□□ -0.77
UFD1-208ENST00000484101 RWDD2BP57060 319 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 NOMO3P69849 1222 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 IGBP1P78318 339 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 TFAMQ00059 246 aaKnown RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 CAP1Q01518 475 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 SMC1AQ14683 1233 aaKnown RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 AMHR2Q16671 573 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 ZNF667Q5HYK9 610 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 ZBTB41Q5SVQ8 909 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 LMBRD2Q68DH5 695 aaPredicted RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 TLK2Q86UE8 772 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 MREGQ8N565 214 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 TMEM35BQ8NCS4 154 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 OR5B17Q8NGF7 314 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 NPLOC4Q8TAT6 608 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 FAM71BQ8TC56 605 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 CD99L2Q8TCZ2 262 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 TRAPPC12Q8WVT3 735 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 USP6NLQ92738 828 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 LRRC1Q9BTT6 524 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 EPC1Q9H2F5 836 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 PACSIN2Q9UNF0 486 aaPredicted RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 COG5Q9UP83 839 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 GNEQ9Y223 722 aaKnown RBP10.27□□□□□ -0.77
UFD1-208ENST00000484101 NUB1Q9Y5A7 615 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 MROH7Q68CQ1 1323 aa10.27□□□□□ -0.77
UFD1-208ENST00000484101 A0A087WZ62 844 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 A0A1B0GUA9 196 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 MYO1FO00160 1098 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 THAP12O43422 761 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 ALDH1A1P00352 501 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 STAG3L1P0CL83 205 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 COMTP21964 271 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 POLR2BP30876 1174 aaKnown RBP10.26□□□□□ -0.77
UFD1-208ENST00000484101 HOXD11P31277 338 aaPredicted RBP10.26□□□□□ -0.77
UFD1-208ENST00000484101 CHRNA3P32297 505 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 CETN2P41208 172 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 TNFSF9P41273 254 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 GRM5P41594 1212 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 TNNT3P45378 269 aaPredicted RBP10.26□□□□□ -0.77
UFD1-208ENST00000484101 DNA2P51530 1060 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 WNT7BP56706 349 aa10.26□□□□□ -0.77
UFD1-208ENST00000484101 GSCP56915 257 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms