RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 DMAC2Q9NW81 257 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 TAS2R14Q9NYV8 317 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 ZNF212Q9UDV6 495 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 ALG6Q9Y672 507 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 FAM86B1E9PN63 330 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 DCTN3O75935 186 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 ACSL3O95573 720 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 FAM86B2P0C5J1 330 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 YY1P25490 414 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 MTTPP55157 894 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 CTTNQ14247 550 aaKnown RBP12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 CRY2Q49AN0 593 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 MORC4Q8TE76 937 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 DHRS1Q96LJ7 313 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 ROPN1BQ9BZX4 212 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 NACA2Q9H009 215 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 ROPN1Q9HAT0 212 aaPredicted RBP12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 SEL1LQ9UBV2 794 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 BTAF1O14981 1849 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 EXOC3O60645 756 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 HARSP12081 509 aaKnown RBP12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 MOGSQ13724 837 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 ZNF568Q3ZCX4 644 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 CBWD6Q4V339 395 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 CBWD3Q5JTY5 395 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 CBWD5Q5RIA9 395 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 TRIM67Q6ZTA4 783 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 TRIM50Q86XT4 487 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 ART4Q93070 314 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 PPP2R3CQ969Q6 453 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 VTI1AQ96AJ9 217 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 HSPBAP1Q96EW2 488 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 CCDC17Q96LX7 622 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 EIF2AK1Q9BQI3 630 aaKnown RBP12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 PTTG2Q9NZH5 202 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 BTBD7Q9P203 1132 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 NUMBLQ9Y6R0 609 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 TAF1LQ8IZX4 1826 aa12.24□□□□□ -0.45
SEC61A1-205ENST00000483956 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 LSM1O15116 133 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 MSH4O15457 936 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 MTA2O94776 668 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 DSG1Q02413 1049 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 TTC27Q6P3X3 843 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 CYFIP1Q7L576 1253 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 NANOGNBQ7Z5D8 188 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 RPGRQ92834 1020 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 AGPAT1Q99943 283 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 ARPC5LQ9BPX5 153 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 ECSITQ9BQ95 431 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 BCAS3Q9H6U6 928 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 PHTF1Q9UMS5 762 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 HEY1Q9Y5J3 304 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 LRRC37AA6NMS7 1700 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 HTR3EA5X5Y0 456 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 FAM13AO94988 1023 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 IDO1P14902 403 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 VPS41P49754 854 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 MYL7Q01449 175 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 THOC5Q13769 683 aaKnown RBP12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 ZNF362Q5T0B9 420 aaPredicted RBP12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 GRAMD4Q6IC98 578 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 CEP70Q8NHQ1 597 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 GAB3Q8WWW8 586 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 RSPH1Q8WYR4 309 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 TAOK3Q9H2K8 898 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 STARD13Q9Y3M8 1113 aa12.23□□□□□ -0.45
SEC61A1-205ENST00000483956 CYP4A11Q02928 519 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 STRN3Q13033 797 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 CYLC2Q14093 348 aaPredicted RBP12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 MAP7D1Q3KQU3 841 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 LRRC8BQ6P9F7 803 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 CCDC137Q6PK04 289 aaKnown RBP12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 ARHGEF18Q6ZSZ5 1173 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 C1orf186Q6ZWK4 172 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 TREML1Q86YW5 311 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 C12orf50Q8NA57 414 aaPredicted RBP12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 KRT35Q92764 455 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 SRPK1Q96SB4 655 aaKnown RBP12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 SMC6Q96SB8 1091 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 FIZ1Q96SL8 496 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 HSD17B14Q9BPX1 270 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 AMNQ9BXJ7 453 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 PARVGQ9HBI0 331 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 TUFT1Q9NNX1 390 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 NKIRAS1Q9NYS0 192 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 TBK1Q9UHD2 729 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 ZFP69BQ9UJL9 534 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 FRMD4BQ9Y2L6 1034 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 RBBP6Q7Z6E9 1792 aaKnown RBP12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 TMEM110-MUSTN1A8MSY1 372 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 GSC2O15499 205 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 ZNF862O60290 1169 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 CYP3A4P08684 503 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 NMT1P30419 496 aaKnown RBP12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 RGS2P41220 211 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 SEL1L2Q5TEA6 688 aa12.22□□□□□ -0.45
SEC61A1-205ENST00000483956 STXBP4Q6ZWJ1 553 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms