RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 SLC23A1Q9UHI7 598 aa5.56□□□□□ -1.52
COMMD3-213ENST00000483684 AJAP1Q9UKB5 411 aaPredicted RBP5.56□□□□□ -1.52
COMMD3-213ENST00000483684 INTUQ9ULD6 942 aa5.56□□□□□ -1.52
COMMD3-213ENST00000483684 TNKSO95271 1327 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 KLHL33A6NCF5 533 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 FAM171A2A8MVW0 826 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 RAP2AP10114 183 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 FPR1P21462 350 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 ALDH1A3P47895 512 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 PTPN21Q16825 1174 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 GEN1Q17RS7 908 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 KIAA1614Q5VZ46 1190 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 SEM1Q6ZVN7 128 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 ASPSCR1Q9BZE9 553 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 HSFX1Q9UBD0 423 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 MTO1Q9Y2Z2 717 aaKnown RBP5.55□□□□□ -1.52
COMMD3-213ENST00000483684 KAT6AQ92794 2004 aa5.55□□□□□ -1.52
COMMD3-213ENST00000483684 PEX1O43933 1283 aa5.54□□□□□ -1.52
COMMD3-213ENST00000483684 SF3B3Q15393 1217 aaKnown RBP5.54□□□□□ -1.52
COMMD3-213ENST00000483684 PNMA8AQ86V59 439 aaPredicted RBP5.54□□□□□ -1.52
COMMD3-213ENST00000483684 HASPINQ8TF76 798 aa5.54□□□□□ -1.52
COMMD3-213ENST00000483684 MARS2Q96GW9 593 aaKnown RBP5.54□□□□□ -1.52
COMMD3-213ENST00000483684 TEKT5Q96M29 485 aa5.54□□□□□ -1.52
COMMD3-213ENST00000483684 C7orf25Q9BPX7 421 aa5.54□□□□□ -1.52
COMMD3-213ENST00000483684 BRINP2Q9C0B6 783 aa5.54□□□□□ -1.52
COMMD3-213ENST00000483684 HOMER2Q9NSB8 354 aa5.54□□□□□ -1.52
COMMD3-213ENST00000483684 TMEM140Q9NV12 185 aa5.54□□□□□ -1.52
COMMD3-213ENST00000483684 MRFAP1Q9Y605 127 aa5.54□□□□□ -1.52
COMMD3-213ENST00000483684 ACTL7AQ9Y615 435 aa5.54□□□□□ -1.52
COMMD3-213ENST00000483684 MPPED1O15442 326 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 KCNAB3O43448 404 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 PROM1O43490 865 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 AMY1AP04745 511 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 IBSPP21815 317 aaPredicted RBP5.53□□□□□ -1.52
COMMD3-213ENST00000483684 ITPKBP27987 946 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 PCSK1P29120 753 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 MAPK10P53779 464 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 SSBP2P81877 361 aaPredicted RBP5.53□□□□□ -1.52
COMMD3-213ENST00000483684 ODF1Q14990 250 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 BRDTQ58F21 947 aaPredicted RBP5.53□□□□□ -1.52
COMMD3-213ENST00000483684 ZNF529Q6P280 563 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 VWA1Q6PCB0 445 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 RHOT1Q8IXI2 618 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 ZGPATQ8N5A5 531 aaKnown RBP5.53□□□□□ -1.52
COMMD3-213ENST00000483684 NUP133Q8WUM0 1156 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 CASKIN2Q8WXE0 1202 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 DDB2Q92466 427 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 MED15Q96RN5 788 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 MYOCQ99972 504 aa5.53□□□□□ -1.52
COMMD3-213ENST00000483684 SAP30BPQ9UHR5 308 aaKnown RBP5.53□□□□□ -1.52
COMMD3-213ENST00000483684 NOP58Q9Y2X3 529 aaKnown RBP5.53□□□□□ -1.52
COMMD3-213ENST00000483684 AOX1Q06278 1338 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 LOC105371045A0A1W2PR82 267 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 CCDC151A5D8V7 595 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 MANSC4A6NHS7 340 aaPredicted RBP5.52□□□□□ -1.53
COMMD3-213ENST00000483684 GPR32O75388 356 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 ELFN1P0C7U0 828 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 SRGNP10124 158 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 GPD1P21695 349 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 WASP42768 502 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 SLC16A1P53985 500 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 NOMO3P69849 1222 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 KRT85P78386 507 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 KIF23Q02241 960 aaPredicted RBP5.52□□□□□ -1.53
COMMD3-213ENST00000483684 NOMO2Q5JPE7 1267 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 RAB24Q969Q5 203 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 CYFIP2Q96F07 1278 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 PNKPQ96T60 521 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 MANSC1Q9H8J5 431 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 CPNE5Q9HCH3 593 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 RUVBL1Q9Y265 456 aaKnown RBP5.52□□□□□ -1.53
COMMD3-213ENST00000483684 PCDHA13Q9Y5I0 950 aa5.52□□□□□ -1.53
COMMD3-213ENST00000483684 MYBBP1AQ9BQG0 1328 aaKnown RBP5.51□□□□□ -1.53
COMMD3-213ENST00000483684 TRGV11A0A075B6L2 103 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 IKBKBO14920 756 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 YY2O15391 372 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 PRKCGP05129 697 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 DDCP20711 480 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 CCND1P24385 295 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 GRIA3P42263 894 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 RGS19P49795 217 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 SOX10P56693 466 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 SLFN5Q08AF3 891 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 MTM1Q13496 603 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 EFCAB2Q5VUJ9 269 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 MIGA2Q7L4E1 593 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 PEG10Q86TG7 708 aaKnown RBP5.51□□□□□ -1.53
COMMD3-213ENST00000483684 PDPRQ8NCN5 879 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 SLC13A1Q9BZW2 595 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 LIMCH1Q9UPQ0 1083 aa5.51□□□□□ -1.53
COMMD3-213ENST00000483684 TEX33O43247 280 aa5.5□□□□□ -1.53
COMMD3-213ENST00000483684 HTRA2O43464 458 aaPredicted RBP5.5□□□□□ -1.53
COMMD3-213ENST00000483684 EDNRBP24530 442 aa5.5□□□□□ -1.53
COMMD3-213ENST00000483684 ATP8B2P98198 1209 aa5.5□□□□□ -1.53
COMMD3-213ENST00000483684 EZH2Q15910 746 aaKnown RBP5.5□□□□□ -1.53
COMMD3-213ENST00000483684 NBPF8Q3BBV2 869 aa5.5□□□□□ -1.53
COMMD3-213ENST00000483684 C3orf36Q3SXR2 165 aa5.5□□□□□ -1.53
COMMD3-213ENST00000483684 KAZNQ674X7 775 aa5.5□□□□□ -1.53
COMMD3-213ENST00000483684 UBE3BQ7Z3V4 1068 aa5.5□□□□□ -1.53
COMMD3-213ENST00000483684 HDAC10Q969S8 669 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms