RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 VIPAS39Q9H9C1 493 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 PCDHA3Q9Y5H8 950 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 MROH7Q68CQ1 1323 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 DOCK3Q8IZD9 2030 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 TNPO2O14787 897 aaKnown RBP14.12□□□□□ -0.15
CPNE1-225ENST00000483495 RAD51CO43502 376 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 CLSTN1O94985 981 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 HEXIM1O94992 359 aaKnown RBP14.12□□□□□ -0.15
CPNE1-225ENST00000483495 FGGP02679 453 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 HOXA11P31270 313 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-225ENST00000483495 TM4SF4P48230 202 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 PSEN2P49810 448 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 MRPS25P82663 173 aaKnown RBP14.12□□□□□ -0.15
CPNE1-225ENST00000483495 CRHR2Q13324 411 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 KIZQ2M2Z5 673 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 IFT20Q8IY31 132 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 BTBD6Q96KE9 485 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 ACAP3Q96P50 834 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 SLITRK6Q9H5Y7 841 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 PCDHGC3Q9UN70 934 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 TMEM110-MUSTN1A8MSY1 372 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 SART1O43290 800 aaKnown RBP14.11□□□□□ -0.15
CPNE1-225ENST00000483495 ECM2O94769 699 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-225ENST00000483495 STAU1O95793 577 aaKnown RBP14.11□□□□□ -0.15
CPNE1-225ENST00000483495 CYP2C9P11712 490 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 HOXC8P31273 242 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 CDH5P33151 784 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-225ENST00000483495 HIC1Q14526 733 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 TMEM132DQ14C87 1099 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 PPP2R5EQ16537 467 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 ZNF667Q5HYK9 610 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 LIN9Q5TKA1 542 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 PLEKHA7Q6IQ23 1121 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 APBB1IPQ7Z5R6 666 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-225ENST00000483495 KLHL7Q8IXQ5 586 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 EIF1ADQ8N9N8 165 aaKnown RBP14.11□□□□□ -0.15
CPNE1-225ENST00000483495 AP1M1Q9BXS5 423 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 ZNF518BQ9C0D4 1074 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 FAM49AQ9H0Q0 323 aaPredicted RBP14.11□□□□□ -0.15
CPNE1-225ENST00000483495 AP5M1Q9H0R1 490 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 ADAM22Q9P0K1 906 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 ANAPC7Q9UJX3 599 aa14.11□□□□□ -0.15
CPNE1-225ENST00000483495 ITGB3P05106 788 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 WEE2P0C1S8 567 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 ITGA4P13612 1032 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 DARSP14868 501 aaKnown RBP14.1□□□□□ -0.15
CPNE1-225ENST00000483495 HSPA6P17066 643 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 CD58P19256 250 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 MMP8P22894 467 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 CTGFP29279 349 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 SLC1A1P43005 524 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 MARCKSL1P49006 195 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 EPHB4P54760 987 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 IRX5P78411 483 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-225ENST00000483495 SMC1AQ14683 1233 aaKnown RBP14.1□□□□□ -0.15
CPNE1-225ENST00000483495 EMBQ6PCB8 327 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 RUFY4Q6ZNE9 571 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 PASD1Q8IV76 773 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 GSPT2Q8IYD1 628 aaKnown RBP14.1□□□□□ -0.15
CPNE1-225ENST00000483495 KATNAL1Q9BW62 490 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 FAM124BQ9H5Z6 455 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-225ENST00000483495 PLEKHA5Q9HAU0 1116 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 ITGA11Q9UKX5 1188 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 CA12O43570 354 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 SPOPO43791 374 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 KRT19P08727 400 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 PAEPP09466 180 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 FGFR4P22455 802 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 EIF4BP23588 611 aaKnown RBP14.1□□□□□ -0.15
CPNE1-225ENST00000483495 GUCY2DQ02846 1103 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 ZNF211Q13398 564 aaPredicted RBP14.1□□□□□ -0.15
CPNE1-225ENST00000483495 MAMLD1Q13495 774 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 WDR72Q3MJ13 1102 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 SLC27A1Q6PCB7 646 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 CAVIN3Q969G5 261 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 HHIPL1Q96JK4 782 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 C11orf70Q9BRQ4 267 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 CYP3A43Q9HB55 503 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 CDHR5Q9HBB8 845 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 EPB41L5Q9HCM4 733 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 MRPL47Q9HD33 250 aaKnown RBP14.1□□□□□ -0.15
CPNE1-225ENST00000483495 NXF1Q9UBU9 619 aaKnown RBP14.1□□□□□ -0.15
CPNE1-225ENST00000483495 POLIQ9UNA4 740 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 DERAQ9Y315 318 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 SCINQ9Y6U3 715 aa14.1□□□□□ -0.15
CPNE1-225ENST00000483495 MYO1FO00160 1098 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 AKR1A1P14550 325 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 BRD2P25440 801 aaKnown RBP14.09□□□□□ -0.15
CPNE1-225ENST00000483495 AXLP30530 894 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 NNTQ13423 1086 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 FSCN1Q16658 493 aaKnown RBP14.09□□□□□ -0.15
CPNE1-225ENST00000483495 NOTUMQ6P988 496 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 SCARA5Q6ZMJ2 495 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 MMS22LQ6ZRQ5 1243 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 CATSPER4Q7RTX7 472 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 CPNE8Q86YQ8 564 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 TMEM35BQ8NCS4 154 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.09□□□□□ -0.15
CPNE1-225ENST00000483495 TFAP2BQ92481 460 aa14.09□□□□□ -0.15
CPNE1-225ENST00000483495 HINFPQ9BQA5 517 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms