RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 CCDC127Q96BQ5 260 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 PWWP2AQ96N64 755 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 RANBP17Q9H2T7 1088 aaKnown RBP13.15□□□□□ -0.3
CCDC78-213ENST00000482878 FSCN2O14926 492 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 WFS1O76024 890 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 GH1P01241 217 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 DESP17661 470 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 RARRES1P49788 294 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 C1QTNF12Q5T7M4 302 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 RBM12BQ8IXT5 1001 aaKnown RBP13.15□□□□□ -0.3
CCDC78-213ENST00000482878 DTX3LQ8TDB6 740 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 DHX38Q92620 1227 aaKnown RBP13.15□□□□□ -0.3
CCDC78-213ENST00000482878 TRAPPC9Q96Q05 1148 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 MXRA8Q9BRK3 442 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 FBXO28Q9NVF7 368 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 NMRK1Q9NWW6 199 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 WHRNQ9P202 907 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 STOML1Q9UBI4 398 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 ZNF232Q9UNY5 417 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 UBR3Q6ZT12 1888 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 SLC16A4O15374 487 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 MYCLP12524 364 aaPredicted RBP13.15□□□□□ -0.3
CCDC78-213ENST00000482878 IVDP26440 423 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 KYNUQ16719 465 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 HELQQ8TDG4 1101 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 TMEM174Q8WUU8 243 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 SERPINB12Q96P63 405 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 RIT2Q99578 217 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 KCNH7Q9NS40 1196 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 STK32BQ9NY57 414 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 UVRAGQ9P2Y5 699 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 SERPINA10Q9UK55 444 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 MRPL11Q9Y3B7 192 aaKnown RBP13.15□□□□□ -0.3
CCDC78-213ENST00000482878 ATRNL1Q5VV63 1379 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 MFAP3P55082 362 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 CDR2Q01850 454 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 MYBPC3Q14896 1274 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 ASAP3Q8TDY4 903 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 DDX1Q92499 740 aaKnown RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 SLCO2A1Q92959 643 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 ABTB1Q969K4 478 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 DMAP1Q9NPF5 467 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 TOPORSQ9NS56 1045 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 BLOC1S6Q9UL45 172 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 NRXN2Q9P2S2 1712 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 SMAPO00193 183 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 P4HBP07237 508 aaKnown RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 MAPTP10636 758 aaKnown RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 ADSSP30520 456 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 PEX3P56589 373 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 GTF2BQ00403 316 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 MCL1Q07820 350 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 ASRGL1Q7L266 308 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 PHLDB2Q86SQ0 1253 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 CDAN1Q8IWY9 1227 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 CYP4X1Q8N118 509 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 IL31RAQ8NI17 732 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 UTP4Q969X6 686 aaKnown RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 DDX27Q96GQ7 796 aaKnown RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 ZWILCHQ9H900 591 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 EHMT1Q9H9B1 1298 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 USP20Q9Y2K6 914 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 LRCH1Q9Y2L9 728 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 PCNTO95613 3336 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 RBBP6Q7Z6E9 1792 aaKnown RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 O00370 1275 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 GSTA2P09210 222 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 ITGA8P53708 1063 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 SPP2Q13103 211 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 ALCAMQ13740 583 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 SNRNP35Q16560 246 aaKnown RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 SDCCAG8Q86SQ7 713 aaPredicted RBP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 LDHDQ86WU2 507 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 AGGF1Q8N302 714 aaeCLIP13.14□□□□□ -0.31
CCDC78-213ENST00000482878 TMEM39BQ9GZU3 492 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 MYLK2Q9H1R3 596 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 COL20A1Q9P218 1284 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 ATXN10Q9UBB4 475 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 ANAPC7Q9UJX3 599 aa13.14□□□□□ -0.31
CCDC78-213ENST00000482878 E7ENQ6 273 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 ENTPD3O75355 529 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 TTC4O95801 387 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 FAM200BP0CF97 657 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 CETPP11597 493 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 ITIH2P19823 946 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 RXRBP28702 533 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 VHLP40337 213 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 VPS41P49754 854 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 DAB2IPQ5VWQ8 1189 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 OR52E8Q6IFG1 317 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 TAS1R2Q8TE23 839 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 PITPNM3Q9BZ71 974 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 TBK1Q9UHD2 729 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms