RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 PDZD3Q86UT5 571 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 LSRQ86X29 649 aaPredicted RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 CREBRFQ8IUR6 639 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 ZFPM1Q8IX07 1006 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 RBBP8NLQ8NC74 664 aaPredicted RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 KIAA0895Q8NCT3 520 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 GOLGA1Q92805 767 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 GATA6Q92908 595 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 SCLT1Q96NL6 688 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 PLIN2Q99541 437 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 EIF3CQ99613 913 aaKnown RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 NAPGQ99747 312 aaPredicted RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 TTYH3Q9C0H2 523 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 NRSN2Q9GZP1 204 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 NDST4Q9H3R1 872 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 TDRD3Q9H7E2 651 aaKnown RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 TUFT1Q9NNX1 390 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 PANK4Q9NVE7 773 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 CDC23Q9UJX2 597 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 FEM1BQ9UK73 627 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 ZNF646O15015 1829 aaPredicted RBP8.4□□□□□ -1.07
SNX13-208ENST00000482558 SIPA1L1O43166 1804 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 ARFGEF1Q9Y6D6 1849 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 TRIM49BA6NDI0 452 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 B2RBV5 119 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 GCOM1H8Y6P7 765 aaPredicted RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 PSMD14O00487 310 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 PLD2O14939 933 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 EDIL3O43854 480 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 TADA3O75528 432 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 ABLIM3O94929 683 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 ASNSP08243 561 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 POLR2MP0CAP2 368 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 H2AFXP16104 143 aaPredicted RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 RPS12P25398 132 aaKnown RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 RPL13P26373 211 aaKnown RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 ANXA13P27216 316 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 MAOBP27338 520 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 HALP42357 657 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 PMS1P54277 932 aaKnown RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 GEMIN4P57678 1058 aaKnown RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 TGFB2P61812 414 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 ZNF252P-AS1Q0IIN9 211 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 COASYQ13057 564 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 TNIP1Q15025 636 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 HP1BP3Q5SSJ5 553 aaPredicted RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 SRGAP1Q7Z6B7 1085 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 STRA8Q7Z7C7 330 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 LRRTM3Q86VH5 581 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 SIAH1Q8IUQ4 282 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 PPM1KQ8N3J5 372 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 SYT2Q8N9I0 419 aaPredicted RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 C19orf47Q8N9M1 422 aaKnown RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 ETNPPLQ8TBG4 499 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 GRIN3AQ8TCU5 1115 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 NEK9Q8TD19 979 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 GAL3ST3Q96A11 431 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 DNAJC19Q96DA6 116 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 PRMT6Q96LA8 375 aaPredicted RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 WDR11Q9BZH6 1224 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 GBP3Q9H0R5 595 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 RSPH9Q9H1X1 276 aaPredicted RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 SLC39A2Q9NP94 309 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 INTS7Q9NVH2 962 aaKnown RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 SEL1LQ9UBV2 794 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 ZNF70Q9UC06 446 aaPredicted RBP8.39□□□□□ -1.07
SNX13-208ENST00000482558 PLAGL2Q9UPG8 496 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 PCDHB5Q9Y5E4 795 aa8.39□□□□□ -1.07
SNX13-208ENST00000482558 UBE4BO95155 1302 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 SSU72P8A0A1W2PR75 194 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 DYTNA2CJ06 578 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 DBX1A6NMT0 343 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 B4DLN1 442 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 PDXKO00764 312 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 CETN3O15182 167 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 TLR3O15455 904 aaKnown RBP8.38□□□□□ -1.07
SNX13-208ENST00000482558 GPR39O43194 453 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 CALUO43852 315 aaPredicted RBP8.38□□□□□ -1.07
SNX13-208ENST00000482558 ERLIN1O75477 346 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 DLGAP3O95886 979 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 FCER1AP12319 257 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 DRD2P14416 443 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 CHRNA5P30532 468 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 ERVK-24P63145 666 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 SOX4Q06945 474 aaPredicted RBP8.38□□□□□ -1.07
SNX13-208ENST00000482558 CKAP4Q07065 602 aaKnown RBP8.38□□□□□ -1.07
SNX13-208ENST00000482558 GOLGA8FQ08AF8 430 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 GOLGA8DPQ0D2H9 430 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 KIF5AQ12840 1032 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 ELF2Q15723 593 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 KIF4BQ2VIQ3 1234 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 ZCWPW2Q504Y3 356 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 PRR16Q569H4 304 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 HERC4Q5GLZ8 1057 aaPredicted RBP8.38□□□□□ -1.07
SNX13-208ENST00000482558 MIIPQ5JXC2 388 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 ZNF569Q5MCW4 686 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 SCARA3Q6AZY7 606 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 USP17L6PQ6QN14 398 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 TMCO3Q6UWJ1 677 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 NIPA1Q7RTP0 329 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms