RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 PAX3P23760 479 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 IGFBP6P24592 240 aaPredicted RBP12.14□□□□□ -0.47
SORT1-204ENST00000482236 PNPLA4P41247 253 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 PTPN5P54829 565 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 TWF1Q12792 350 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 BFSP1Q12934 665 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 VEPH1Q14D04 833 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 FAM26FQ5R3K3 315 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 SPATA1Q5VX52 437 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 SLC8B1Q6J4K2 584 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 SLC39A4Q6P5W5 647 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 RSPO2Q6UXX9 243 aaPredicted RBP12.14□□□□□ -0.47
SORT1-204ENST00000482236 RTL10Q7L3V2 364 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 RSAD2Q8WXG1 361 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 NXPE3Q969Y0 559 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 CCDC34Q96HJ3 373 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 ANKRD36BP1Q96IX9 119 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 GCNAQ96QF7 691 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 SEPT5Q99719 369 aaPredicted RBP12.14□□□□□ -0.47
SORT1-204ENST00000482236 RHOBTB2Q9BYZ6 727 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 ASAH2Q9NR71 780 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 EXOC1Q9NV70 894 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 HCFC1R1Q9NWW0 138 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 CA14Q9ULX7 337 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 DUSP12Q9UNI6 340 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 C2CD2Q9Y426 696 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 NUMBLQ9Y6R0 609 aa12.14□□□□□ -0.47
SORT1-204ENST00000482236 CITO14578 2027 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 EXTL3O43909 919 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 TNNC2P02585 160 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 RHOP08100 348 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 OR4Q2P0C623 313 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 ATF2P15336 505 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 GARTP22102 1010 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 CASP5P51878 434 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 EPHB3P54753 998 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 TSPY1Q01534 308 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 KCNA1Q09470 495 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 C9orf57Q5W0N0 161 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 SHC4Q6S5L8 630 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 BMP8AQ7Z5Y6 402 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 NELFCDQ8IXH7 590 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 GPD1LQ8N335 351 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 DNAJC19Q96DA6 116 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 MCRS1Q96EZ8 462 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 SENP8Q96LD8 212 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 FNBP1Q96RU3 617 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 KCNH6Q9H252 994 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 BLZF1Q9H2G9 400 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 IKZF4Q9H2S9 585 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 EPS15L1Q9UBC2 864 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 AFF4Q9UHB7 1163 aaKnown RBP12.13□□□□□ -0.47
SORT1-204ENST00000482236 KCNH3Q9ULD8 1083 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 MUC3AQ02505 3323 aa12.13□□□□□ -0.47
SORT1-204ENST00000482236 GOLGA6L4A6NEF3 574 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 M0QZQ0 153 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 CYB561D2O14569 222 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 KIAA0391O15091 583 aaKnown RBP12.12□□□□□ -0.47
SORT1-204ENST00000482236 NARSO43776 548 aaKnown RBP12.12□□□□□ -0.47
SORT1-204ENST00000482236 HUS1O60921 280 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 PDGFBP01127 241 aaPredicted RBP12.12□□□□□ -0.47
SORT1-204ENST00000482236 ITGB3P05106 788 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 SRFP11831 508 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 POLR2BP30876 1174 aaKnown RBP12.12□□□□□ -0.47
SORT1-204ENST00000482236 CYP2J2P51589 502 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 LILRA4P59901 499 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 MYO1EQ12965 1108 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 PKP1Q13835 747 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 MGAT5BQ3V5L5 792 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 SLC39A12Q504Y0 691 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 CD300LGQ6UXG3 332 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 RNF19BQ6ZMZ0 732 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 NT5DC4Q86YG4 428 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 BRSK2Q8IWQ3 736 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 TMEM130Q8N3G9 435 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 CSGALNACT2Q8N6G5 542 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 ITFG1Q8TB96 612 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 FGF13Q92913 245 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 HPS3Q969F9 1004 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 ASIC4Q96FT7 647 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 FIZ1Q96SL8 496 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 KXD1Q9BQD3 176 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 CBWD1Q9BRT8 395 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 DNMT3BQ9UBC3 853 aaKnown RBP12.12□□□□□ -0.47
SORT1-204ENST00000482236 PCDHA7Q9UN72 937 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 AGAP1Q9UPQ3 857 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 YIPF1Q9Y548 306 aa12.12□□□□□ -0.47
SORT1-204ENST00000482236 ZNF233A6NK53 670 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 PPEF2O14830 753 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 MEFVO15553 781 aaPredicted RBP12.11□□□□□ -0.47
SORT1-204ENST00000482236 FAM189A1O60320 539 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 N4BP1O75113 896 aaKnown RBP12.11□□□□□ -0.47
SORT1-204ENST00000482236 PPP1R37O75864 691 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 DLATP10515 647 aaKnown RBP12.11□□□□□ -0.47
SORT1-204ENST00000482236 TYMPP19971 482 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 AVPR2P30518 371 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 VCPP55072 806 aaKnown RBP12.11□□□□□ -0.47
SORT1-204ENST00000482236 SURF1Q15526 300 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 ARHGAP15Q53QZ3 475 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms