RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 PPM1AP35813 382 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 ATP6V1E1P36543 226 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 MTNR1BP49286 362 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 PDE6CP51160 858 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 SLC5A3P53794 718 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 KIAA2012Q0VF49 1180 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 SPIDRQ14159 915 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 EIF4HQ15056 248 aaKnown RBP4.65□□□□□ -1.67
VPS41-212ENST00000482217 MEA1Q16626 185 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 ANO4Q32M45 955 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 IRGCQ6NXR0 463 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 LILRA6Q6PI73 481 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 NEK10Q6ZWH5 1172 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 BTN2A1Q7KYR7 527 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 LYSMD2Q8IV50 215 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 REXO1L1PQ8IX06 675 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 RTKN2Q8IZC4 609 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 ZBTB34Q8NCN2 500 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 OR5AN1Q8NGI8 311 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 SLC30A5Q8TAD4 765 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 GIMAP1Q8WWP7 306 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 ASB12Q8WXK4 309 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 ZCCHC14Q8WYQ9 949 aaKnown RBP4.65□□□□□ -1.67
VPS41-212ENST00000482217 ITFG2Q969R8 447 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 RIPOR3Q96MK2 946 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 NT5C1BQ96P26 610 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 GPATCH1Q9BRR8 931 aaKnown RBP4.65□□□□□ -1.67
VPS41-212ENST00000482217 NOL10Q9BSC4 688 aaKnown RBP4.65□□□□□ -1.67
VPS41-212ENST00000482217 TTLL2Q9BWV7 592 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 VPS11Q9H270 941 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 KCTD10Q9H3F6 313 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 L2HGDHQ9H9P8 463 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 ZNF277Q9NRM2 450 aaPredicted RBP4.65□□□□□ -1.67
VPS41-212ENST00000482217 SAE1Q9UBE0 346 aaPredicted RBP4.65□□□□□ -1.67
VPS41-212ENST00000482217 GPR45Q9Y5Y3 372 aa4.65□□□□□ -1.67
VPS41-212ENST00000482217 KIF5CO60282 957 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 B3GALNT1O75752 331 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 KLHL18O94889 574 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 HSPA4LO95757 839 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 ZBED1O96006 694 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 LPLP06858 475 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 PARP1P09874 1014 aaKnown RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 CCDC159P0C7I6 412 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 ALAS1P13196 640 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 BTF3P20290 206 aaKnown RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 AGXTP21549 392 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 ELF1P32519 619 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 ETV4P43268 484 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 NPTX2P47972 431 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 PAPOLAP51003 745 aaKnown RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 FXR1P51114 621 aaKnown RBP eCLIP4.64□□□□□ -1.67
VPS41-212ENST00000482217 LGALS4P56470 323 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 SESN2P58004 480 aaPredicted RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 CCT2P78371 535 aaKnown RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 SRSF2Q01130 221 aaKnown RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 TNFAIP2Q03169 654 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 TOP3AQ13472 1001 aaPredicted RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 TRIM25Q14258 630 aaKnown RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 CLUL1Q15846 466 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 MAN2A1Q16706 1144 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 MUM1Q2TAK8 710 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 TOR2AQ5JU69 321 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 FAM26FQ5R3K3 315 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 IFIT1BQ5T764 474 aaKnown RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 TATDN1Q6P1N9 297 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 OTOP2Q7RTS6 562 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 DNAJB7Q7Z6W7 309 aaPredicted RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 ANKRD18AQ8IVF6 992 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 ESX1Q8N693 406 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 ANKRD52Q8NB46 1076 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 MSANTD4Q8NCY6 345 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 PPP1R35Q8TAP8 253 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 GAB3Q8WWW8 586 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 CEP95Q96GE4 821 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 HIC2Q96JB3 615 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 OSBPL6Q9BZF3 934 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 QRSL1Q9H0R6 528 aaKnown RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 BHMT2Q9H2M3 363 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 UNC45AQ9H3U1 944 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 UBN1Q9NPG3 1134 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 NMRK2Q9NPI5 230 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 PLSCR4Q9NRQ2 329 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 ABCF3Q9NUQ8 709 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 POLR3BQ9NW08 1133 aaPredicted RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 RTEL1Q9NZ71 1219 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 WDR35Q9P2L0 1181 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 EPS15L1Q9UBC2 864 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 SUN2Q9UH99 717 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 EIF2B4Q9UI10 523 aaKnown RBP4.64□□□□□ -1.67
VPS41-212ENST00000482217 EDARQ9UNE0 448 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 LRCH1Q9Y2L9 728 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 VWA7Q9Y334 891 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 CDY2AQ9Y6F7 541 aa4.64□□□□□ -1.67
VPS41-212ENST00000482217 A0A087WV62 115 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 C9orf118A6NHY6 69 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 A6NLC8 198 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 DDX3XO00571 662 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS41-212ENST00000482217 FFAR3O14843 346 aa4.63□□□□□ -1.67
VPS41-212ENST00000482217 XPOTO43592 962 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms