RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 GJA1P17302 382 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 CYP3A5P20815 502 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 GRM2Q14416 872 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 SF3A1Q15459 793 aaKnown RBP20.48■□□□□ 0.87
ABCF3-214ENST00000480562 IQCEQ6IPM2 695 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 SLC39A4Q6P5W5 647 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 DSTYKQ6XUX3 929 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 TPRG1Q6ZUI0 275 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 MAML2Q8IZL2 1156 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-214ENST00000480562 PGLYRP2Q96PD5 576 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 MSTO1Q9BUK6 570 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 BCO2Q9BYV7 579 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 LTB4R2Q9NPC1 389 aa20.48■□□□□ 0.87
ABCF3-214ENST00000480562 SPATA6Q9NWH7 488 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-214ENST00000480562 EP300Q09472 2414 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-214ENST00000480562 MOSPD3O75425 235 aa20.47■□□□□ 0.87
ABCF3-214ENST00000480562 VNN2O95498 520 aa20.47■□□□□ 0.87
ABCF3-214ENST00000480562 LMNAP02545 664 aaKnown RBP20.47■□□□□ 0.87
ABCF3-214ENST00000480562 NMT1P30419 496 aaKnown RBP20.47■□□□□ 0.87
ABCF3-214ENST00000480562 LONP1P36776 959 aaKnown RBP20.47■□□□□ 0.87
ABCF3-214ENST00000480562 AARSP49588 968 aaKnown RBP eCLIP20.47■□□□□ 0.87
ABCF3-214ENST00000480562 KYAT1Q16773 422 aa20.47■□□□□ 0.87
ABCF3-214ENST00000480562 BRAPQ7Z569 592 aa20.47■□□□□ 0.87
ABCF3-214ENST00000480562 USP37Q86T82 979 aa20.47■□□□□ 0.87
ABCF3-214ENST00000480562 BEST2Q8NFU1 509 aa20.47■□□□□ 0.87
ABCF3-214ENST00000480562 SEMA4AQ9H3S1 761 aa20.47■□□□□ 0.87
ABCF3-214ENST00000480562 ZFP14Q9HCL3 533 aa20.47■□□□□ 0.87
ABCF3-214ENST00000480562 HEBP1Q9NRV9 189 aa20.47■□□□□ 0.87
ABCF3-214ENST00000480562 MAFFQ9ULX9 164 aa20.47■□□□□ 0.87
ABCF3-214ENST00000480562 A0A0B4J269 797 aa20.46■□□□□ 0.87
ABCF3-214ENST00000480562 TBCAO75347 108 aaKnown RBP20.46■□□□□ 0.87
ABCF3-214ENST00000480562 MICAL2O94851 1124 aa20.46■□□□□ 0.87
ABCF3-214ENST00000480562 BMP15O95972 392 aa20.46■□□□□ 0.87
ABCF3-214ENST00000480562 TARSP26639 723 aaKnown RBP20.46■□□□□ 0.87
ABCF3-214ENST00000480562 JADE1Q6IE81 842 aa20.46■□□□□ 0.87
ABCF3-214ENST00000480562 ASB16Q96NS5 453 aa20.46■□□□□ 0.87
ABCF3-214ENST00000480562 FIZ1Q96SL8 496 aa20.46■□□□□ 0.87
ABCF3-214ENST00000480562 OSBPL6Q9BZF3 934 aa20.46■□□□□ 0.87
ABCF3-214ENST00000480562 CRISPLD1Q9H336 500 aa20.46■□□□□ 0.87
ABCF3-214ENST00000480562 ASAH2Q9NR71 780 aa20.46■□□□□ 0.87
ABCF3-214ENST00000480562 YIPF1Q9Y548 306 aa20.46■□□□□ 0.87
ABCF3-214ENST00000480562 ZNF292O60281 2723 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 VPS37CA5D8V6 355 aaPredicted RBP20.45■□□□□ 0.86
ABCF3-214ENST00000480562 TISP43B9A030 160 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 ANKRD63C9JTQ0 380 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 XPOTO43592 962 aaKnown RBP20.45■□□□□ 0.86
ABCF3-214ENST00000480562 ADRB2P07550 413 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 NFICP08651 508 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 SCP2P22307 547 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 GTF2BQ00403 316 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 DUSP4Q13115 394 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 TEAD2Q15562 447 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 ZC2HC1CQ53FD0 456 aaPredicted RBP20.45■□□□□ 0.86
ABCF3-214ENST00000480562 SPATA1Q5VX52 437 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 ZC3H14Q6PJT7 736 aaKnown RBP20.45■□□□□ 0.86
ABCF3-214ENST00000480562 USP49Q70CQ1 688 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 LARP4BQ92615 738 aaKnown RBP20.45■□□□□ 0.86
ABCF3-214ENST00000480562 SMARCD2Q92925 531 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 TRMT61BQ9BVS5 477 aaKnown RBP20.45■□□□□ 0.86
ABCF3-214ENST00000480562 BRD9Q9H8M2 597 aa20.45■□□□□ 0.86
ABCF3-214ENST00000480562 CPSF3Q9UKF6 684 aaKnown RBP20.45■□□□□ 0.86
ABCF3-214ENST00000480562 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.45■□□□□ 0.86
ABCF3-214ENST00000480562 OR6C75A6NL08 312 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 SHISA7A6NL88 538 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 SPTLC1O15269 473 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 LAMTOR5O43504 91 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 VIPR2P41587 438 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 ACOT2P49753 483 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 EPHA5P54756 1037 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 LILRA4P59901 499 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 OVOS1Q6IE37 1185 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 VITQ6UXI7 678 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 MAP4K3Q8IVH8 894 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 EPSTI1Q96J88 318 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 SENP8Q96LD8 212 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 TSPAN18Q96SJ8 248 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 SLC27A5Q9Y2P5 690 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 CLIC4Q9Y696 253 aa20.44■□□□□ 0.86
ABCF3-214ENST00000480562 TYMPP19971 482 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 GDI1P31150 447 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 DDIT3P35638 169 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 GPR17Q13304 367 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 C9orf57Q5W0N0 161 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 ZNF852Q6ZMS4 543 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 CD302Q8IX05 232 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 ATAD1Q8NBU5 361 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 LEMD2Q8NC56 503 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 SHKBP1Q8TBC3 707 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 ZSCAN18Q8TBC5 510 aaPredicted RBP20.43■□□□□ 0.86
ABCF3-214ENST00000480562 DNASE1L2Q92874 299 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 TMEM209Q96SK2 561 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 NELL2Q99435 816 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 OXCT2Q9BYC2 517 aaPredicted RBP20.43■□□□□ 0.86
ABCF3-214ENST00000480562 CCSER1Q9C0I3 900 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 DNAJC25Q9H1X3 360 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 IKZF4Q9H2S9 585 aa20.43■□□□□ 0.86
ABCF3-214ENST00000480562 CDR1P51861 262 aa20.42■□□□□ 0.86
ABCF3-214ENST00000480562 CSTF1Q05048 431 aaKnown RBP20.42■□□□□ 0.86
ABCF3-214ENST00000480562 PLD1Q13393 1074 aa20.42■□□□□ 0.86
ABCF3-214ENST00000480562 TMEM132DQ14C87 1099 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms