RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	EYS	Q5T1H1	3165 aa		5.49	□□□□□ -1.53
HDAC6-223	ENST00000480525	OBSL1	O75147	1896 aa		5.49	□□□□□ -1.53
HDAC6-223	ENST00000480525	NUP210	Q8TEM1	1887 aa	Predicted RBP	5.49	□□□□□ -1.53
HDAC6-223	ENST00000480525	MYH10	P35580	1976 aa		5.49	□□□□□ -1.53
HDAC6-223	ENST00000480525	CLUH	O75153	1309 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	NOTCH4	Q99466	2003 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	BDP1	A6H8Y1	2624 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	KIF26A	Q9ULI4	1882 aa	Predicted RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	KPNA7	A9QM74	516 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	TISP43	B9A030	160 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	TADA2A	O75478	443 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	AKAP3	O75969	853 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	ASS1	P00966	412 aa	Known RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	C4BPA	P04003	597 aa	Known RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	NFIC	P08651	508 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	TMEM191B	P0C7N4	346 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	CCDC192	P0DO97	292 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	KRT13	P13646	458 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	ATF2	P15336	505 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	PFKL	P17858	780 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	TRIM21	P19474	475 aa	Known RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	DNAJB1	P25685	340 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	EEF1G	P26641	437 aa	Known RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	PCSK1	P29120	753 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	CASP1	P29466	404 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	OR1G1	P47890	313 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	CLCN4	P51793	760 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	VAMP7	P51809	220 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	NLRP12	P59046	1061 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	ERVFC1	P60507	584 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	YWHAH	Q04917	246 aa	Predicted RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	SPAG1	Q07617	926 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	INCA1	Q0VD86	236 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	CETN1	Q12798	172 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	GPR17	Q13304	367 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	NFE2	Q16621	373 aa	Predicted RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	STX1A	Q16623	288 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	SGSM1	Q2NKQ1	1148 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	CFAP221	Q4G0U5	840 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	TPRN	Q4KMQ1	711 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	ZBTB41	Q5SVQ8	909 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	FAM117B	Q6P1L5	589 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	CCDC149	Q6ZUS6	474 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	TRAPPC11	Q7Z392	1133 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	TMC7	Q7Z402	723 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	UNC93A	Q86WB7	457 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	TMEM173	Q86WV6	379 aa	Predicted RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	CDR2L	Q86X02	465 aa	Predicted RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	TRIM59	Q8IWR1	403 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	FAM186B	Q8IYM0	893 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	TCEAL8	Q8IYN2	117 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	SMRP1	Q8NCR6	262 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	C3orf58	Q8NDZ4	430 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	MAFA	Q8NHW3	353 aa	Predicted RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	ZNF461	Q8TAF7	563 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	GDPD5	Q8WTR4	605 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	SLC22A17	Q8WUG5	538 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	BCL7C	Q8WUZ0	217 aa	Predicted RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	HLA-C	Q95604	372 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	HPS3	Q969F9	1004 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	SLC35C1	Q96A29	364 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	MSLNL	Q96KJ4	702 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	GPR62	Q9BZJ7	368 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	NAT10	Q9H0A0	1025 aa	Known RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	XYLT2	Q9H1B5	865 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	THAP9	Q9H5L6	903 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	SFXN1	Q9H9B4	322 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	CYP3A43	Q9HB55	503 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	PDE11A	Q9HCR9	933 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	POLD4	Q9HCU8	107 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	ANO10	Q9NW15	660 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	THEG	Q9P2T0	379 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	ARMCX3	Q9UH62	379 aa	Predicted RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	AFF4	Q9UHB7	1163 aa	Known RBP	5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	SIX4	Q9UIU6	781 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	FBXL5	Q9UKA1	691 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	FBXW11	Q9UKB1	542 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	UST	Q9Y2C2	406 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	NUB1	Q9Y5A7	615 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	ANAPC1	Q9H1A4	1944 aa		5.48	□□□□□ -1.53
HDAC6-223	ENST00000480525	CASTOR2	A6NHX0	329 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	LRRIQ3	A6PVS8	624 aa	Predicted RBP	5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	TEX28	O15482	410 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	FGF19	O95750	216 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	GLUD1	P00367	558 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	CNP	P09543	421 aa	Known RBP	5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	TNNI1	P19237	187 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	WARS	P23381	471 aa	Known RBP	5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	TBXAS1	P24557	533 aa	Predicted RBP	5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	WEE1	P30291	646 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	MAGEA11	P43364	429 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	MXI1	P50539	228 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	GCNT1	Q02742	428 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	HYAL1	Q12794	435 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	PLD1	Q13393	1074 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	SMAD4	Q13485	552 aa	Known RBP	5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	PSMD5	Q16401	504 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	TCEAL5	Q5H9L2	206 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	GLRA4	Q5JXX5	417 aa		5.47	□□□□□ -1.53
HDAC6-223	ENST00000480525	RTP2	Q5QGT7	225 aa		5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms