RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 FAM71AQ8IYT1 594 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 ABI1Q8IZP0 508 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
SIK3-209ENST00000480222 BCO2Q9BYV7 579 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 CYP3A43Q9HB55 503 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 ZKSCAN5Q9Y2L8 839 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 DNAH12Q6ZR08 3092 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.49□□□□□ -0.25
SIK3-209ENST00000480222 EVI5O60447 810 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 AMHP03971 560 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 CSF2RAP15509 400 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 ITGB8P26012 769 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 SOX4Q06945 474 aaPredicted RBP13.49□□□□□ -0.25
SIK3-209ENST00000480222 TCTN1Q2MV58 587 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 WDR72Q3MJ13 1102 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 TDRD12Q587J7 1177 aaKnown RBP13.49□□□□□ -0.25
SIK3-209ENST00000480222 CLLU1OSQ5K130 101 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 CCDC170Q8IYT3 715 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 CRIPAKQ8N1N5 446 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 UBR7Q8N806 425 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 KAT5Q92993 513 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 TATDN2Q93075 761 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 ARID3AQ99856 593 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 IL23AQ9NPF7 189 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 RNF19AQ9NV58 838 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 CNTN6Q9UQ52 1028 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 INPP5FQ9Y2H2 1132 aa13.49□□□□□ -0.25
SIK3-209ENST00000480222 PODXLO00592 558 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 GFPT2O94808 682 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 ACO1P21399 889 aaKnown RBP13.48□□□□□ -0.25
SIK3-209ENST00000480222 IBSPP21815 317 aaPredicted RBP13.48□□□□□ -0.25
SIK3-209ENST00000480222 CYLC1P35663 651 aaPredicted RBP13.48□□□□□ -0.25
SIK3-209ENST00000480222 BPIFB4P59827 614 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 FPGSQ05932 587 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 DSC1Q08554 894 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 KLHL30Q0D2K2 578 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
SIK3-209ENST00000480222 HGSNATQ68CP4 663 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 PSRC1Q6PGN9 363 aaPredicted RBP13.48□□□□□ -0.25
SIK3-209ENST00000480222 VPS36Q86VN1 386 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 C7orf61Q8IZ16 206 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 LRRC43Q8N309 656 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 VWCEQ96DN2 955 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.25
SIK3-209ENST00000480222 GDAP2Q9NXN4 497 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 NXF1Q9UBU9 619 aaKnown RBP13.48□□□□□ -0.25
SIK3-209ENST00000480222 TSC2P49815 1807 aa13.48□□□□□ -0.25
SIK3-209ENST00000480222 SCN1AP35498 2009 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 FNDC1Q4ZHG4 1894 aaPredicted RBP13.47□□□□□ -0.25
SIK3-209ENST00000480222 ARHGEF37A1IGU5 675 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 SOWAHDA6NJG2 315 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 KPNA7A9QM74 516 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 TMEM189-UBE2V1I3L0A0 370 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 FOXN3O00409 490 aaPredicted RBP13.47□□□□□ -0.25
SIK3-209ENST00000480222 IPO7O95373 1038 aaKnown RBP13.47□□□□□ -0.25
SIK3-209ENST00000480222 POMCP01189 267 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 FGFR1P11362 822 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 KRT5P13647 590 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 PDE6CP51160 858 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 ZNF132P52740 706 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 INCA1Q0VD86 236 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 UPP1Q16831 310 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 IRF2BP2Q7Z5L9 587 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 ZSCAN30Q86W11 494 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 ZNF830Q96NB3 372 aaPredicted RBP13.47□□□□□ -0.25
SIK3-209ENST00000480222 DNAI2Q9GZS0 605 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 DEF6Q9H4E7 631 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 NHEJ1Q9H9Q4 299 aaPredicted RBP13.47□□□□□ -0.25
SIK3-209ENST00000480222 GOLGA2P5Q9HBQ8 144 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 CISHQ9NSE2 258 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 TBC1D13Q9NVG8 400 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 MIOSQ9NXC5 875 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 ARHGAP20Q9P2F6 1191 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 COL4A6Q14031 1691 aa13.47□□□□□ -0.25
SIK3-209ENST00000480222 CARNS1A5YM72 827 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 PPEF2O14830 753 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 CCP110O43303 1012 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 FAM163BP0C2L3 166 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 PNMA6AP0CW24 399 aaPredicted RBP13.46□□□□□ -0.25
SIK3-209ENST00000480222 USP8P40818 1118 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 AARSP49588 968 aaKnown RBP eCLIP13.46□□□□□ -0.25
SIK3-209ENST00000480222 CLCNKBP51801 687 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 AFF1P51825 1210 aaKnown RBP13.46□□□□□ -0.25
SIK3-209ENST00000480222 LILRA4P59901 499 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 ARID5AQ03989 594 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.25
SIK3-209ENST00000480222 SCARA3Q6AZY7 606 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 SCARA5Q6ZMJ2 495 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 DPH6Q7L8W6 267 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 ZNF677Q86XU0 584 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 TOP6BLQ8N6T0 577 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 RBBP8NLQ8NC74 664 aaPredicted RBP13.46□□□□□ -0.25
SIK3-209ENST00000480222 SPATA18Q8TC71 538 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 EPS8L1Q8TE68 723 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 CCDC42Q96M95 316 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 SMYD3Q9H7B4 428 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 POLIQ9UNA4 740 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 PCDHB4Q9Y5E5 795 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 SNX9Q9Y5X1 595 aa13.46□□□□□ -0.25
SIK3-209ENST00000480222 CEP290O15078 2479 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms