RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PDE1AP54750 535 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 SLC14A1Q13336 389 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 FBXO43Q4G163 708 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 LRRC69Q6ZNQ3 347 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 GLRX5Q86SX6 157 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 CDR2LQ86X02 465 aaPredicted RBP13.19□□□□□ -0.3
USP11-208ENST00000480104 FMNL3Q8IVF7 1028 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 BPIFB1Q8TDL5 484 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 EZH1Q92800 747 aaPredicted RBP13.19□□□□□ -0.3
USP11-208ENST00000480104 JPH2Q9BR39 696 aaPredicted RBP13.19□□□□□ -0.3
USP11-208ENST00000480104 UNC45AQ9H3U1 944 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 HPS4Q9NQG7 708 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 OBP2AQ9NY56 170 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 USP9YO00507 2555 aaPredicted RBP13.19□□□□□ -0.3
USP11-208ENST00000480104 ERVH48-1M5A8F1 160 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 ARHGAP33O14559 1287 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 CBFA2T3O75081 653 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 GJB3O75712 270 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 SFNP31947 248 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 P2RY2P41231 377 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 MCM2P49736 904 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 JAK3P52333 1124 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 ANTXR2P58335 489 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 NAB2Q15742 525 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 JAKMIP3Q5VZ66 844 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 ANO5Q75V66 913 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 TMC8Q8IU68 726 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 TEX2Q8IWB9 1127 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 FRMD1Q8N878 549 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 PDCD7Q8N8D1 485 aaKnown RBP13.18□□□□□ -0.3
USP11-208ENST00000480104 OLIG1Q8TAK6 271 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 CEP76Q8TAP6 659 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 SPATA18Q8TC71 538 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 IGDCC4Q8TDY8 1250 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 RILPL2Q969X0 211 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 LENG9Q96B70 501 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 POLR3CQ9BUI4 534 aaPredicted RBP13.18□□□□□ -0.3
USP11-208ENST00000480104 LRRC3Q9BY71 257 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 CXCL16Q9H2A7 254 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 GKN1Q9NS71 199 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 KCNK4Q9NYG8 393 aa13.18□□□□□ -0.3
USP11-208ENST00000480104 KIAA1522Q9P206 1035 aaPredicted RBP13.18□□□□□ -0.3
USP11-208ENST00000480104 TLX3O43711 291 aaPredicted RBP13.17□□□□□ -0.3
USP11-208ENST00000480104 B3GAT3O94766 335 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 ARF4P18085 180 aaPredicted RBP13.17□□□□□ -0.3
USP11-208ENST00000480104 GALK1P51570 392 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 RUNX3Q13761 415 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 AMHR2Q16671 573 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 TRIM68Q6AZZ1 485 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 PPP1R18Q6NYC8 613 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 TTC30AQ86WT1 665 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 SPRYD3Q8NCJ5 442 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 SLC7A3Q8WY07 619 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 SPACA7Q96KW9 195 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 P2RY13Q9BPV8 354 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 EBF3Q9H4W6 596 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
USP11-208ENST00000480104 TOR4AQ9NXH8 423 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 PCOLCE2Q9UKZ9 415 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 TAF6LQ9Y6J9 622 aa13.17□□□□□ -0.3
USP11-208ENST00000480104 UTP20O75691 2785 aaKnown RBP13.17□□□□□ -0.3
USP11-208ENST00000480104 TMEM189-UBE2V1I3L0A0 370 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 INO80B-WBP1J3KQ70 363 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 B4GALT5O43286 388 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 GAS7O60861 476 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 THP07101 528 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 C6P13671 934 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 BRCC3P46736 316 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 NPEPPSP55786 919 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 NCBP1Q09161 790 aaKnown RBP13.16□□□□□ -0.3
USP11-208ENST00000480104 PSMD2Q13200 908 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 NBR1Q14596 966 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 TPGS2Q68CL5 300 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 SLC27A1Q6PCB7 646 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 CD300LGQ6UXG3 332 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 TMTC3Q6ZXV5 915 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 RALYLQ86SE5 291 aaKnown RBP13.16□□□□□ -0.3
USP11-208ENST00000480104 GALNT15Q8N3T1 639 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
USP11-208ENST00000480104 SPIRE2Q8WWL2 714 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 GJA10Q969M2 543 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 FAM83CQ9BQN1 747 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 SMG9Q9H0W8 520 aaKnown RBP13.16□□□□□ -0.3
USP11-208ENST00000480104 THG1LQ9NWX6 298 aaKnown RBP13.16□□□□□ -0.3
USP11-208ENST00000480104 TPCN1Q9ULQ1 816 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 AHCTF1Q8WYP5 2266 aa13.16□□□□□ -0.3
USP11-208ENST00000480104 SMCO2A6NFE2 343 aa13.15□□□□□ -0.3
USP11-208ENST00000480104 MSH4O15457 936 aa13.15□□□□□ -0.3
USP11-208ENST00000480104 RRP8O43159 456 aaKnown RBP13.15□□□□□ -0.3
USP11-208ENST00000480104 DKK1O94907 266 aa13.15□□□□□ -0.3
USP11-208ENST00000480104 ATXN1LP0C7T5 689 aaKnown RBP13.15□□□□□ -0.3
USP11-208ENST00000480104 ARSAP15289 507 aa13.15□□□□□ -0.3
USP11-208ENST00000480104 PCBP1Q15365 356 aaKnown RBP eCLIP13.15□□□□□ -0.3
USP11-208ENST00000480104 GPR158Q5T848 1215 aa13.15□□□□□ -0.3
USP11-208ENST00000480104 LMBRD2Q68DH5 695 aaPredicted RBP13.15□□□□□ -0.3
USP11-208ENST00000480104 MIER3Q7Z3K6 550 aa13.15□□□□□ -0.3
USP11-208ENST00000480104 C3orf58Q8NDZ4 430 aa13.15□□□□□ -0.3
USP11-208ENST00000480104 KIF2CQ99661 725 aa13.15□□□□□ -0.3
USP11-208ENST00000480104 DIAPH3Q9NSV4 1193 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms