RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-204	ENST00000480057	ELN	P15502	786 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	CYP3A5	P20815	502 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	FGFR4	P22455	802 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	VEGFB	P49765	207 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	MGAT3	Q09327	533 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	PTK7	Q13308	1070 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	RPS6KA1	Q15418	735 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	KCNA10	Q16322	511 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	UBXN11	Q5T124	520 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	TAF3	Q5VWG9	929 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	MTERF4	Q7Z6M4	381 aa	Known RBP	11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	PHF13	Q86YI8	300 aa	Predicted RBP	11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	CREG2	Q8IUH2	290 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	HACE1	Q8IYU2	909 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	BEST2	Q8NFU1	509 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	TMEM40	Q8WWA1	233 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	KIF12	Q96FN5	646 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	PBK	Q96KB5	322 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	DPP3	Q9NY33	737 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	LCMT1	Q9UIC8	334 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	UBQLN1	Q9UMX0	589 aa	Known RBP	11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	PCDHGC3	Q9UN70	934 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	PIN4	Q9Y237	131 aa	Known RBP	11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	STXBP5L	Q9Y2K9	1186 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	CDY2A	Q9Y6F7	541 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	SQOR	Q9Y6N5	450 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	MYH10	P35580	1976 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	UMODL1	Q5DID0	1318 aa		11.77	□□□□□ -0.53
VTI1A-204	ENST00000480057	TMCO5B	A8MYB1	307 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	GPR182	O15218	404 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	MED7	O43513	233 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	KIF4A	O95239	1232 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	KRT19	P08727	400 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	ABCB4	P21439	1286 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	CDH5	P33151	784 aa	Predicted RBP	11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	PAFAH1B1	P43034	410 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	NSF	P46459	744 aa	Known RBP	11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	MYO1E	Q12965	1108 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	CLUL1	Q15846	466 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	FAM26D	Q5JW98	314 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	LIN9	Q5TKA1	542 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	PEX26	Q7Z412	305 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	DAAM2	Q86T65	1068 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	NT5DC3	Q86UY8	548 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	FAM228A	Q86W67	206 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	LRRN4CL	Q8ND94	238 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	ARHGEF26	Q96DR7	871 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	HPDL	Q96IR7	371 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	RPS6KC1	Q96S38	1066 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	TRAIP	Q9BWF2	469 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	EIF2A	Q9BY44	585 aa	Known RBP	11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	PDCL3	Q9H2J4	239 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	SNTG2	Q9NY99	539 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	AMFR	Q9UKV5	643 aa		11.76	□□□□□ -0.53
VTI1A-204	ENST00000480057	MIF4GD	A9UHW6	222 aa	Known RBP	11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	THAP12	O43422	761 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	BUB1B	O60566	1050 aa	Predicted RBP	11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	RPS6KA5	O75582	802 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	RECQL4	O94761	1208 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	CLSTN1	O94985	981 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	FAM163B	P0C2L3	166 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	ATF7	P17544	494 aa	Predicted RBP	11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	POLR2B	P30876	1174 aa	Known RBP	11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	PNPLA4	P41247	253 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	ACLY	P53396	1101 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	NOMO3	P69849	1222 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	INCA1	Q0VD86	236 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	ELF2	Q15723	593 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	ERCC6L	Q2NKX8	1250 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	WDR72	Q3MJ13	1102 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	CFAP221	Q4G0U5	840 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	FAM47C	Q5HY64	1035 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	MCOLN2	Q8IZK6	566 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	USP38	Q8NB14	1042 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	CAGE1	Q8TC20	777 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	ZNF606	Q8WXB4	792 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	RUBCN	Q92622	972 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	ZNF653	Q96CK0	615 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	HES6	Q96HZ4	224 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	SELENOO	Q9BVL4	669 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	LHX5	Q9H2C1	402 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	HMX1	Q9NP08	348 aa	Predicted RBP	11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	OSGEP	Q9NPF4	335 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	ACP6	Q9NPH0	428 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	CTTNBP2NL	Q9P2B4	639 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	PUF60	Q9UHX1	559 aa	Known RBP	11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	KIAA1257	Q9ULG3	409 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	AGAP1	Q9UPQ3	857 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	NOC2L	Q9Y3T9	749 aa	Known RBP	11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	GRIN2D	O15399	1336 aa		11.75	□□□□□ -0.53
VTI1A-204	ENST00000480057	TLR3	O15455	904 aa	Known RBP	11.74	□□□□□ -0.53
VTI1A-204	ENST00000480057	SRGAP2	O75044	1071 aa		11.74	□□□□□ -0.53
VTI1A-204	ENST00000480057	CILP	O75339	1184 aa		11.74	□□□□□ -0.53
VTI1A-204	ENST00000480057	FTCD	O95954	541 aa		11.74	□□□□□ -0.53
VTI1A-204	ENST00000480057	INHA	P05111	366 aa		11.74	□□□□□ -0.53
VTI1A-204	ENST00000480057	RAB27A	P51159	221 aa		11.74	□□□□□ -0.53
VTI1A-204	ENST00000480057	TNNC1	P63316	161 aa		11.74	□□□□□ -0.53

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