RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 IKBKGQ9Y6K9 419 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 CNTNAP2Q9UHC6 1331 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 LRRC53A6NM62 1247 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 MCF2P10911 925 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 VAMP7P51809 220 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 MKRN4PQ13434 485 aaPredicted RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 HSDL1Q3SXM5 330 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 RINLQ6ZS11 566 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 ADAT2Q7Z6V5 191 aaKnown RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 EFCAB13Q8IY85 973 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 TMEM35BQ8NCS4 154 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 HELQQ8TDG4 1101 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 PPP1R13LQ8WUF5 828 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 APOL5Q9BWW9 433 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 SEMA6BQ9H3T3 888 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 KCNMB3Q9NPA1 279 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 IL23AQ9NPF7 189 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 OLFML3Q9NRN5 406 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 MOSPD1Q9UJG1 213 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 FAM169AQ9Y6X4 670 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 MYH6P13533 1939 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 GTPBP10A4D1E9 387 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 SP100P23497 879 aaPredicted RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 NMT1P30419 496 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 HNRNPH3P31942 346 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 HSD17B4P51659 736 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 PABPC1LQ4VXU2 614 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 ANKS3Q6ZW76 656 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 PALB2Q86YC2 1186 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 TMEM139Q8IV31 216 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 MAIP1Q8WWC4 291 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.32□□□□□ -1.4
CPS1-207ENST00000479988 IPO11Q9UI26 975 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 TRAF3IP3Q9Y228 551 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 DOCK2Q92608 1830 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 LAMB2P55268 1798 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 NRAPQ86VF7 1730 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 BAZ2AQ9UIF9 1905 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 GRID2IPA4D2P6 1211 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 WNT7AO00755 349 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 P4HA2O15460 535 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 ABCB4P21439 1286 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 GCLMP48507 274 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 HARS2P49590 506 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 SGSM1Q2NKQ1 1148 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 DNAJC24Q6P3W2 148 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 SLC39A5Q6ZMH5 540 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 ZNF365Q70YC5 407 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 CEP68Q76N32 757 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 CATSPER3Q86XQ3 398 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 NPAS4Q8IUM7 802 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 CCDC60Q8IWA6 550 aaPredicted RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 KIAA0895Q8NCT3 520 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 SCFD1Q8WVM8 642 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 SMG7Q92540 1137 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 CPB2Q96IY4 423 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 MMTAG2Q9BU76 263 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 ATXN3LQ9H3M9 355 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 AGPAT5Q9NUQ2 364 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 GCNT4Q9P109 453 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 PADI3Q9ULW8 664 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 DOLKQ9UPQ8 538 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 PCDHB5Q9Y5E4 795 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 PCDHB2Q9Y5E7 798 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 CASZ1Q86V15 1759 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 ADGRA2Q96PE1 1338 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 DDX60Q8IY21 1712 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 ACKR2O00590 384 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 TREHO43280 583 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 CSDE1O75534 798 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 MBL2P11226 248 aaPredicted RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 FGFR4P22455 802 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 OAS2P29728 719 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 GJA8P48165 433 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 LHX1P48742 406 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 GLUD2P49448 558 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 EVX2Q03828 476 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 SLC18A3Q16572 532 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 PAPD7Q5XG87 772 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 ALKBH5Q6P6C2 394 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 ERICH1Q86X53 443 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 SLC5A5Q92911 643 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 MRRFQ96E11 262 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 HPDLQ96IR7 371 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 MS4A4AQ96JQ5 239 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 GPR20Q99678 358 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 REEP2Q9BRK0 252 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 UBE2TQ9NPD8 197 aaPredicted RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 ASAH2Q9NR71 780 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 DPP3Q9NY33 737 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 INTUQ9ULD6 942 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 CCDC188H7C350 402 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 CYB561D2O14569 222 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 SLC9A3R1O14745 358 aaPredicted RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 MAP3K7O43318 606 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 RNASEH1O60930 286 aaKnown RBP6.32□□□□□ -1.4
CPS1-207ENST00000479988 LRRN2O75325 713 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 PDGFRBP09619 1106 aa6.32□□□□□ -1.4
CPS1-207ENST00000479988 CLK2P49760 499 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms