RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 PLEKHG4Q58EX7 1191 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 C9orf57Q5W0N0 161 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 TMEM270Q6UE05 265 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 SLC24A5Q71RS6 500 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 NOP9Q86U38 636 aaKnown RBP12.02□□□□□ -0.49
APTX-223ENST00000479656 GLYCTKQ8IVS8 523 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 UBR7Q8N806 425 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 LNX1Q8TBB1 728 aaPredicted RBP12.02□□□□□ -0.49
APTX-223ENST00000479656 LINC01599Q8WXQ3 324 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 PGBD4Q96DM1 585 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 C16orf45Q96MC5 204 aaPredicted RBP12.02□□□□□ -0.49
APTX-223ENST00000479656 PPP1R10Q96QC0 940 aaKnown RBP12.02□□□□□ -0.49
APTX-223ENST00000479656 RPS6KC1Q96S38 1066 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 SYT11Q9BT88 431 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 MCOLN1Q9GZU1 580 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 SDCBP2Q9H190 292 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 WNT8AQ9H1J5 351 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 VRTNQ9H8Y1 702 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 RSAD1Q9HA92 442 aa12.02□□□□□ -0.49
APTX-223ENST00000479656 ANO9A1A5B4 782 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 RCCD1A6NED2 376 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 PIRO00625 290 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 STAU1O95793 577 aaKnown RBP12.01□□□□□ -0.49
APTX-223ENST00000479656 THP07101 528 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 CYP3A5P20815 502 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 RAP1GAPP47736 663 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 SCNN1GP51170 649 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 FAM189BP81408 668 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 MYO1EQ12965 1108 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 BMS1Q14692 1282 aaKnown RBP12.01□□□□□ -0.49
APTX-223ENST00000479656 ZNF394Q53GI3 561 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 CCDC122Q5T0U0 273 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 TAF3Q5VWG9 929 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 NECAB2Q7Z6G3 386 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 KIAA1328Q86T90 577 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
APTX-223ENST00000479656 VPS36Q86VN1 386 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 DNAAF5Q86Y56 855 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 RPUSD2Q8IZ73 545 aaKnown RBP12.01□□□□□ -0.49
APTX-223ENST00000479656 SLC30A5Q8TAD4 765 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 OLIG1Q8TAK6 271 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 EPS8L1Q8TE68 723 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 FTHL17Q9BXU8 183 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 BCO2Q9BYV7 579 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 CISHQ9NSE2 258 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 TMEM39AQ9NV64 488 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 NOCTQ9UK39 431 aaKnown RBP12.01□□□□□ -0.49
APTX-223ENST00000479656 CNTN6Q9UQ52 1028 aa12.01□□□□□ -0.49
APTX-223ENST00000479656 RALGAPA2Q2PPJ7 1873 aa12□□□□□ -0.49
APTX-223ENST00000479656 FAM170AA1A519 330 aa12□□□□□ -0.49
APTX-223ENST00000479656 ENPP3O14638 875 aa12□□□□□ -0.49
APTX-223ENST00000479656 POMCP01189 267 aa12□□□□□ -0.49
APTX-223ENST00000479656 MMEP08473 750 aa12□□□□□ -0.49
APTX-223ENST00000479656 CHRNB2P17787 502 aa12□□□□□ -0.49
APTX-223ENST00000479656 ARHGAP25P42331 645 aa12□□□□□ -0.49
APTX-223ENST00000479656 PTPN14Q15678 1187 aa12□□□□□ -0.49
APTX-223ENST00000479656 NAB2Q15742 525 aa12□□□□□ -0.49
APTX-223ENST00000479656 TCTN1Q2MV58 587 aa12□□□□□ -0.49
APTX-223ENST00000479656 ALKBH5Q6P6C2 394 aaKnown RBP12□□□□□ -0.49
APTX-223ENST00000479656 LRRC52Q8N7C0 313 aa12□□□□□ -0.49
APTX-223ENST00000479656 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
APTX-223ENST00000479656 SEPT8Q92599 483 aa12□□□□□ -0.49
APTX-223ENST00000479656 MMS19Q96T76 1030 aa12□□□□□ -0.49
APTX-223ENST00000479656 LACRTQ9GZZ8 138 aa12□□□□□ -0.49
APTX-223ENST00000479656 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
APTX-223ENST00000479656 SMYD3Q9H7B4 428 aa12□□□□□ -0.49
APTX-223ENST00000479656 UBN1Q9NPG3 1134 aa12□□□□□ -0.49
APTX-223ENST00000479656 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
APTX-223ENST00000479656 SEPT11Q9NVA2 429 aaKnown RBP12□□□□□ -0.49
APTX-223ENST00000479656 CACNG4Q9UBN1 327 aa12□□□□□ -0.49
APTX-223ENST00000479656 TRIM10Q9UDY6 481 aa12□□□□□ -0.49
APTX-223ENST00000479656 NAGPAQ9UK23 515 aa12□□□□□ -0.49
APTX-223ENST00000479656 GOLGA6L9A6NEM1 432 aa12□□□□□ -0.49
APTX-223ENST00000479656 EOMESO95936 686 aa12□□□□□ -0.49
APTX-223ENST00000479656 CLTBP09497 229 aa12□□□□□ -0.49
APTX-223ENST00000479656 P4HA1P13674 534 aa12□□□□□ -0.49
APTX-223ENST00000479656 ANXA13P27216 316 aa12□□□□□ -0.49
APTX-223ENST00000479656 PDE6CP51160 858 aa12□□□□□ -0.49
APTX-223ENST00000479656 VAV2P52735 878 aa12□□□□□ -0.49
APTX-223ENST00000479656 BPIFB4P59827 614 aa12□□□□□ -0.49
APTX-223ENST00000479656 TNNC1P63316 161 aa12□□□□□ -0.49
APTX-223ENST00000479656 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
APTX-223ENST00000479656 DEFB128Q7Z7B8 93 aa12□□□□□ -0.49
APTX-223ENST00000479656 DDX1Q92499 740 aaKnown RBP12□□□□□ -0.49
APTX-223ENST00000479656 FAXDC2Q96IV6 333 aa12□□□□□ -0.49
APTX-223ENST00000479656 PCDHB18PQ96TA0 734 aa12□□□□□ -0.49
APTX-223ENST00000479656 SLC38A7Q9NVC3 462 aa12□□□□□ -0.49
APTX-223ENST00000479656 TBX21Q9UL17 535 aa12□□□□□ -0.49
APTX-223ENST00000479656 INPP5FQ9Y2H2 1132 aa12□□□□□ -0.49
APTX-223ENST00000479656 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
APTX-223ENST00000479656 DUSP10Q9Y6W6 482 aa12□□□□□ -0.49
APTX-223ENST00000479656 TMCO5BA8MYB1 307 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 SPTLC1O15269 473 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 TNNT1P13805 278 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 EN2P19622 333 aaPredicted RBP11.99□□□□□ -0.49
APTX-223ENST00000479656 IGFBP6P24592 240 aaPredicted RBP11.99□□□□□ -0.49
APTX-223ENST00000479656 LRPAP1P30533 357 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 CDR2Q01850 454 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 ARHGAP29Q52LW3 1261 aa11.99□□□□□ -0.49
APTX-223ENST00000479656 DNTTIP2Q5QJE6 756 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms