RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 SUMF1Q8NBK3 374 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 RASSF8Q8NHQ8 419 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 ZSCAN18Q8TBC5 510 aaPredicted RBP14.42□□□□□ -0.1
VCL-205ENST00000478896 DEPDC1BQ8WUY9 529 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 SMARCD2Q92925 531 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 CLDN23Q96B33 292 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 BORCS6Q96GS4 357 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 ZSCAN32Q9NX65 697 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 CEP72Q9P209 647 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 MAFFQ9ULX9 164 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 COL4A2P08572 1712 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 M0QZQ0 153 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 FAM13AO94988 1023 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 OR4Q2P0C623 313 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 LRPAP1P30533 357 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 NCKAP1LP55160 1127 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 DHX8Q14562 1220 aaKnown RBP14.41□□□□□ -0.1
VCL-205ENST00000478896 PUM1Q14671 1186 aaKnown RBP eCLIP14.41□□□□□ -0.1
VCL-205ENST00000478896 PPP2R5DQ14738 602 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 RABEP1Q15276 862 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 TEAD2Q15562 447 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 KYAT1Q16773 422 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 ARL6IP4Q66PJ3 421 aaKnown RBP14.41□□□□□ -0.1
VCL-205ENST00000478896 VITQ6UXI7 678 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 HAUS6Q7Z4H7 955 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 YAF2Q8IY57 180 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 TMEM130Q8N3G9 435 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 FAM3CQ92520 227 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 FAM212AQ96EL1 285 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 CALML4Q96GE6 196 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 OXCT2Q9BYC2 517 aaPredicted RBP14.41□□□□□ -0.1
VCL-205ENST00000478896 RPF1Q9H9Y2 349 aaKnown RBP14.41□□□□□ -0.1
VCL-205ENST00000478896 ZNF334Q9HCZ1 680 aaPredicted RBP14.41□□□□□ -0.1
VCL-205ENST00000478896 ODF2LQ9ULJ1 636 aa14.41□□□□□ -0.1
VCL-205ENST00000478896 SMG5Q9UPR3 1016 aaKnown RBP14.41□□□□□ -0.1
VCL-205ENST00000478896 TTC26A0AVF1 554 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 NRG2O14511 850 aaPredicted RBP14.4□□□□□ -0.1
VCL-205ENST00000478896 ZNF263O14978 683 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 KRT18P05783 430 aaKnown RBP14.4□□□□□ -0.1
VCL-205ENST00000478896 CYP3A5P20815 502 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 GJB2P29033 226 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 VIPR2P41587 438 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 GUCY2FP51841 1108 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 MTAPQ13126 283 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 TMEM119Q4V9L6 283 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 GPBP1Q86WP2 473 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 MYCT1Q8N699 235 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 ZSWIM3Q96MP5 696 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 GPR88Q9GZN0 384 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 HAPLN2Q9GZV7 340 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 ZHX3Q9H4I2 956 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 PRMT8Q9NR22 394 aaPredicted RBP14.4□□□□□ -0.1
VCL-205ENST00000478896 PIAS3Q9Y6X2 628 aa14.4□□□□□ -0.1
VCL-205ENST00000478896 TSC2P49815 1807 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 A0A1W2PRU2 124 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 OR6C75A6NL08 312 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 HEPACAM2A8MVW5 462 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 LACTBL1A8MY62 500 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 OGTO15294 1046 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 MOSPD3O75425 235 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 OAZ2O95190 189 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 ALDH1A3P47895 512 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 EPHB3P54753 998 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 EPHA5P54756 1037 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 DUSP4Q13115 394 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 C8orf34Q49A92 452 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 OVOS1Q6IE37 1185 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 ZBTB44Q8NCP5 570 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 BEST2Q8NFU1 509 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 SHKBP1Q8TBC3 707 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 CSGALNACT1Q8TDX6 532 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 E2F7Q96AV8 911 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 AK8Q96MA6 479 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 REEP2Q9BRK0 252 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 IER2Q9BTL4 223 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 CHRDQ9H2X0 955 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 PARVGQ9HBI0 331 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 GMEB2Q9UKD1 530 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 TBX20Q9UMR3 447 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 ANK1P16157 1881 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 TCHHQ07283 1943 aa14.39□□□□□ -0.11
VCL-205ENST00000478896 NUP210Q8TEM1 1887 aaPredicted RBP14.38□□□□□ -0.11
VCL-205ENST00000478896 SHISA7A6NL88 538 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 TRAK2O60296 914 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 TBCAO75347 108 aaKnown RBP14.38□□□□□ -0.11
VCL-205ENST00000478896 ODC1P11926 461 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 UBA7P41226 1012 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 AARSP49588 968 aaKnown RBP eCLIP14.38□□□□□ -0.116e-7■■■■■ 85.6
VCL-205ENST00000478896 CCR3P51677 355 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 FZD5Q13467 585 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 ENOX2Q16206 610 aaKnown RBP14.38□□□□□ -0.11
VCL-205ENST00000478896 ARSHQ5FYA8 562 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 ARMCX5Q6P1M9 558 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 MAP4K3Q8IVH8 894 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 MFSD6LQ8IWD5 586 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 TMX3Q96JJ7 454 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 MSTO1Q9BUK6 570 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 FAM126AQ9BYI3 521 aaPredicted RBP14.38□□□□□ -0.11
VCL-205ENST00000478896 EPC1Q9H2F5 836 aa14.38□□□□□ -0.11
VCL-205ENST00000478896 LMAN1LQ9HAT1 526 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms