RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 SH3BP5O60239 455 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 THP07101 528 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 HNRNPLP14866 589 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDAC8-217ENST00000478743 IQCEQ6IPM2 695 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 GAREM2Q75VX8 874 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-217ENST00000478743 TEX2Q8IWB9 1127 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 TMEFF1Q8IYR6 380 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 HACE1Q8IYU2 909 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 RDM1Q8NG50 284 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 E2F7Q96AV8 911 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 ZNF512Q96ME7 567 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-217ENST00000478743 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 FNBP1Q96RU3 617 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 JPH2Q9BR39 696 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-217ENST00000478743 FBXL5Q9UKA1 691 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 SLC12A7Q9Y666 1083 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 GON4LQ3T8J9 2241 aa13.54□□□□□ -0.24
HDAC8-217ENST00000478743 OBSL1O75147 1896 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 HIP1O00291 1037 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 TDP2O95551 362 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 CFIP05156 583 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 EDN1P05305 212 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 ARSAP15289 507 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 ABCG1P45844 678 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 PSMC5P62195 406 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
HDAC8-217ENST00000478743 TRIP6Q15654 476 aaKnown RBP13.53□□□□□ -0.24
HDAC8-217ENST00000478743 ANO7Q6IWH7 933 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 SLC23A3Q6PIS1 610 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 RNF19BQ6ZMZ0 732 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 REXO1Q8N1G1 1221 aaKnown RBP13.53□□□□□ -0.24
HDAC8-217ENST00000478743 MINDY1Q8N5J2 469 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 MDGA1Q8NFP4 955 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 BPIFB1Q8TDL5 484 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 EBF3Q9H4W6 596 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 PRORYQ9H606 182 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 DKK4Q9UBT3 224 aa13.53□□□□□ -0.24
HDAC8-217ENST00000478743 PIEZO2Q9H5I5 2752 aa13.52□□□□□ -0.24
HDAC8-217ENST00000478743 A0A1B0GUA9 196 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 hCG_1984214I3L0E3 225 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 ITPKAP23677 461 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.25
HDAC8-217ENST00000478743 GALK1P51570 392 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 CYP4F8P98187 520 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 HAUS6Q7Z4H7 955 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 RASSF3Q86WH2 238 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 SCUBE3Q8IX30 993 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 ELMOD1Q8N336 334 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 TMEM130Q8N3G9 435 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 HDDC3Q8N4P3 179 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 ZNF713Q8N859 430 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-217ENST00000478743 ZMYND12Q9H0C1 365 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 CLMPQ9H6B4 373 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 GKN1Q9NS71 199 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 DENND4CQ5VZ89 1909 aa13.52□□□□□ -0.25
HDAC8-217ENST00000478743 PTPRQQ9UMZ3 2332 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 TSC2P49815 1807 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 DPYSL4O14531 572 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 OPHN1O60890 802 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 CDC27P30260 824 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 RFC5P40937 340 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 LIFRP42702 1097 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 MCM2P49736 904 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 UPP1Q16831 310 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 USP39Q53GS9 565 aaKnown RBP13.51□□□□□ -0.25
HDAC8-217ENST00000478743 GPR158Q5T848 1215 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 APOA5Q6Q788 366 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 SYT12Q8IV01 421 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 TTC9BQ8N6N2 239 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 TSTD1Q8NFU3 115 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 ETNPPLQ8TBG4 499 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 TMEM87BQ96K49 555 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
HDAC8-217ENST00000478743 FAM83CQ9BQN1 747 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 GLT8D2Q9H1C3 349 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 OSBPL3Q9H4L5 887 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 PDZD7Q9H5P4 517 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 BRPF3Q9ULD4 1205 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 COL12A1Q99715 3063 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 SPTA1P02549 2419 aa13.51□□□□□ -0.25
HDAC8-217ENST00000478743 MGAQ8IWI9 3026 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 ESYT2A0FGR8 921 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 TNFRSF10BO14763 440 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 SOAT2O75908 522 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 OR4Q2P0C623 313 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 GLRA2P23416 452 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 RUNX3Q13761 415 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 MRPL58Q14197 206 aaKnown RBP13.5□□□□□ -0.25
HDAC8-217ENST00000478743 MAPK6Q16659 721 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 PEAR1Q5VY43 1037 aaPredicted RBP13.5□□□□□ -0.25
HDAC8-217ENST00000478743 B4GALNT3Q6L9W6 998 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 TOGARAM2Q6ZUX3 1019 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 DEFB119Q8N690 84 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 LEMD2Q8NC56 503 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 OLIG1Q8TAK6 271 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 CNOT6LQ96LI5 555 aaKnown RBP13.5□□□□□ -0.25
HDAC8-217ENST00000478743 PGLYRP2Q96PD5 576 aa13.5□□□□□ -0.25
HDAC8-217ENST00000478743 MTRQ99707 1265 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms