RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 DR1Q01658 176 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 PCBP1Q15365 356 aaKnown RBP eCLIP12.73□□□□□ -0.37
PCCB-214ENST00000478469 NBPF20Q3BBV1 942 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 WDR24Q96S15 920 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 SAMD15Q9P1V8 674 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 MAFBQ9Y5Q3 323 aaPredicted RBP12.73□□□□□ -0.37
PCCB-214ENST00000478469 MAD1L1Q9Y6D9 718 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 ZBTB24O43167 697 aaPredicted RBP12.73□□□□□ -0.37
PCCB-214ENST00000478469 SEPT4O43236 478 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 CYP11B1P15538 503 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 SMPD1P17405 629 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 PHBP35232 272 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 NCKAP1LP55160 1127 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 BASP1P80723 227 aaKnown RBP12.73□□□□□ -0.37
PCCB-214ENST00000478469 BMT2Q1RMZ1 405 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 EFHC2Q5JST6 749 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 ARHGEF18Q6ZSZ5 1173 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 P3H4Q92791 437 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 TATDN2Q93075 761 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 CCDC97Q96F63 343 aaPredicted RBP12.73□□□□□ -0.37
PCCB-214ENST00000478469 ADAM2Q99965 735 aa12.73□□□□□ -0.37
PCCB-214ENST00000478469 NIFKQ9BYG3 293 aaKnown RBP12.73□□□□□ -0.37
PCCB-214ENST00000478469 DHX35Q9H5Z1 703 aaKnown RBP12.73□□□□□ -0.37
PCCB-214ENST00000478469 LACTBL1A8MY62 500 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 RECQL4O94761 1208 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 FAM200BP0CF97 657 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 ACOT1Q86TX2 421 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.72□□□□□ -0.37
PCCB-214ENST00000478469 DEFB118Q96PH6 123 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 KANSL3Q9P2N6 904 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 HEY1Q9Y5J3 304 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 SGPL1O95470 568 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 RALAP11233 206 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 VDRP11473 427 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 MRPS6P82932 125 aaKnown RBP12.72□□□□□ -0.37
PCCB-214ENST00000478469 PRKCZQ05513 592 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 COBLL1Q53SF7 1204 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 CAPN12Q6ZSI9 719 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 RASAL3Q86YV0 1011 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 NSRP1Q9H0G5 558 aaKnown RBP12.72□□□□□ -0.37
PCCB-214ENST00000478469 DHX33Q9H6R0 707 aaKnown RBP12.72□□□□□ -0.37
PCCB-214ENST00000478469 AAASQ9NRG9 546 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 GTF3C4Q9UKN8 822 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 COL1A2P08123 1366 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 POMCP01189 267 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 CDH6P55285 790 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
PCCB-214ENST00000478469 CDT1Q9H211 546 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 PIDD1Q9HB75 910 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 DDX56Q9NY93 547 aaKnown RBP12.72□□□□□ -0.37
PCCB-214ENST00000478469 TRIM10Q9UDY6 481 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 INTUQ9ULD6 942 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 MROH7Q68CQ1 1323 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 MYH1P12882 1939 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 LRRIQ3A6PVS8 624 aaPredicted RBP12.72□□□□□ -0.37
PCCB-214ENST00000478469 TGFB1I1O43294 461 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 CREB3O43889 395 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 APOEP02649 317 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 ATP1A1P05023 1023 aaKnown RBP12.72□□□□□ -0.37
PCCB-214ENST00000478469 GCNT1Q02742 428 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 KRT17Q04695 432 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 GOLGA7BQ2TAP0 167 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 MGAT5BQ3V5L5 792 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 CC2D1AQ6P1N0 951 aaPredicted RBP12.72□□□□□ -0.37
PCCB-214ENST00000478469 SLAIN1Q8ND83 568 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 C1orf131Q8NDD1 294 aaKnown RBP12.72□□□□□ -0.37
PCCB-214ENST00000478469 MCEEQ96PE7 176 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 SIK2Q9H0K1 926 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 KCTD10Q9H3F6 313 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 RSAD1Q9HA92 442 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 ANAPC5Q9UJX4 755 aa12.72□□□□□ -0.37
PCCB-214ENST00000478469 TCHHQ07283 1943 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 RPTORQ8N122 1335 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 CASTOR2A6NHX0 329 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 MOCS2O96007 188 aaPredicted RBP12.71□□□□□ -0.37
PCCB-214ENST00000478469 TRIP13Q15645 432 aaPredicted RBP12.71□□□□□ -0.37
PCCB-214ENST00000478469 FOXR2Q6PJQ5 311 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 ACO2Q99798 780 aaKnown RBP12.71□□□□□ -0.37
PCCB-214ENST00000478469 MORF4L1Q9UBU8 362 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 MAPK13O15264 365 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 BCAR1P56945 870 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 PPP3CAQ08209 521 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 ORC1Q13415 861 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 PIGHQ14442 188 aaPredicted RBP12.71□□□□□ -0.37
PCCB-214ENST00000478469 CBWD6Q4V339 395 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 CBWD3Q5JTY5 395 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 CBWD5Q5RIA9 395 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 ACAD10Q6JQN1 1059 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 MICALCLQ6ZW33 695 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 SAPCD2Q86UD0 394 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 UHMK1Q8TAS1 419 aaKnown RBP12.71□□□□□ -0.37
PCCB-214ENST00000478469 GAD1Q99259 594 aa12.71□□□□□ -0.37
PCCB-214ENST00000478469 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.71□□□□□ -0.372e-7■■□□□ 14
PCCB-214ENST00000478469 ZCCHC17Q9NP64 241 aaKnown RBP12.71□□□□□ -0.37
PCCB-214ENST00000478469 SMIM35A0A1B0GVV1 85 aa12.71□□□□□ -0.38
PCCB-214ENST00000478469 PODXLO00592 558 aa12.71□□□□□ -0.38
PCCB-214ENST00000478469 PRRG1O14668 218 aa12.71□□□□□ -0.38
PCCB-214ENST00000478469 AOC2O75106 756 aa12.71□□□□□ -0.38
PCCB-214ENST00000478469 GRAP2O75791 330 aa12.71□□□□□ -0.38
PCCB-214ENST00000478469 GZMAP12544 262 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms