RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PTPRJQ12913 1337 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 MROH7Q68CQ1 1323 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 C17orf102A2RUQ5 167 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 GPR25O00155 361 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 CALB1P05937 261 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 FAM163BP0C2L3 166 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 CYP2C9P11712 490 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 DARSP14868 501 aaKnown RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 ZSCAN20P17040 1043 aaPredicted RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 ATF7P17544 494 aaPredicted RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 CYP2B6P20813 491 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 CTNNA2P26232 953 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 HOXD10P28358 340 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 GNA15P30679 374 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 POLR2BP30876 1174 aaKnown RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 HOXC8P31273 242 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 CDH5P33151 784 aaPredicted RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 TNFSF9P41273 254 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 CRYBB1P53674 252 aaPredicted RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 GJA9P57773 515 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 MYL6P60660 151 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 MYO1EQ12965 1108 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 PTP4A2Q12974 167 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 CRHR2Q13324 411 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 TMEM132DQ14C87 1099 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 STILQ15468 1287 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 FSCN1Q16658 493 aaKnown RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 ZBTB41Q5SVQ8 909 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 TMEM63BQ5T3F8 832 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 EEF1DP3Q658K8 133 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 C8orf74Q6P047 294 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 TMEM270Q6UE05 265 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 MAATS1Q7Z4T9 603 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 RPAINQ86UA6 219 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 RSPH3Q86UC2 560 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 GPIHBP1Q8IV16 184 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 IFT20Q8IY31 132 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 HACE1Q8IYU2 909 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 MCOLN2Q8IZK6 566 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 USP38Q8NB14 1042 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 NOA1Q8NC60 698 aaKnown RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 TMEM35BQ8NCS4 154 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 CCDC26Q8TAB7 109 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 ZNF564Q8TBZ8 553 aaPredicted RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 KAT2BQ92831 832 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 ZNF653Q96CK0 615 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 MTG1Q9BT17 334 aaPredicted RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 PI4K2AQ9BTU6 479 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 CFHR5Q9BXR6 569 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 BCO2Q9BYV7 579 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 MTMR12Q9C0I1 747 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 XYLT2Q9H1B5 865 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 UPF3AQ9H1J1 476 aaKnown RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 LHX5Q9H2C1 402 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 MINDY3Q9H8M7 445 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 VIPAS39Q9H9C1 493 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 APOBEC3GQ9HC16 384 aaKnown RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.47□□□□□ -1.05
VMA21-203ENST00000477649 CNOT8Q9UFF9 292 aaKnown RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 TMEM59LQ9UK28 342 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 STRIP2Q9ULQ0 834 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 ABT1Q9ULW3 272 aaKnown RBP8.47□□□□□ -1.05
VMA21-203ENST00000477649 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
VMA21-203ENST00000477649 NUB1Q9Y5A7 615 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 ZSWIM8A7E2V4 1837 aa8.47□□□□□ -1.05
VMA21-203ENST00000477649 LACTBL1A8MY62 500 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 M0QZ92 97 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 MYO1FO00160 1098 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 PDE2AO00408 941 aaPredicted RBP8.46□□□□□ -1.06
VMA21-203ENST00000477649 ZNF185O15231 689 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 SEPT4O43236 478 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 B4GALT5O43286 388 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 THAP12O43422 761 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 NCK2O43639 380 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 CEP104O60308 925 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 GPR32O75388 356 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 GNRH1P01148 92 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 CD4P01730 458 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 VTNP04004 478 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 RHOXF2BP0C7M4 288 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 IQCF3P0C7M6 154 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 CXCL8P10145 99 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 GBP1P32455 592 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 CYP2C19P33261 490 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 MAN1A1P33908 653 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 CETN2P41208 172 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 PNPLA4P41247 253 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 WNT7BP56706 349 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 SNX16P57768 344 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 FAM193AP78312 1265 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 NNTQ13423 1086 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 ARHGEF6Q15052 776 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 LONRF2Q1L5Z9 754 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 TAF3Q5VWG9 929 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 LMBRD2Q68DH5 695 aaPredicted RBP8.46□□□□□ -1.06
VMA21-203ENST00000477649 CATSPER4Q7RTX7 472 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 EFCAB13Q8IY85 973 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 KRT222Q8N1A0 295 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 LRRC52Q8N7C0 313 aa8.46□□□□□ -1.06
VMA21-203ENST00000477649 C7orf31Q8N865 590 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms