RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 NOX5Q96PH1 765 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 CELF4Q9BZC1 486 aaKnown RBP12.99□□□□□ -0.33
PRPF39-203ENST00000477626 DDX20Q9UHI6 824 aaKnown RBP12.99□□□□□ -0.33
PRPF39-203ENST00000477626 BUB1O43683 1085 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 ASGR1P07306 291 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 IGFBP6P24592 240 aaPredicted RBP12.99□□□□□ -0.33
PRPF39-203ENST00000477626 AARSP49588 968 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRPF39-203ENST00000477626 ERCC6LQ2NKX8 1250 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 MMGT1Q8N4V1 131 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 CD99L2Q8TCZ2 262 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 ZNF592Q92610 1267 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 PNKPQ96T60 521 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 ELOVL4Q9GZR5 314 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 CISHQ9NSE2 258 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 GTF3C4Q9UKN8 822 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 SAR1BQ9Y6B6 198 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 MGEA5O60502 916 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 MMP8P22894 467 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 MFSD14CQ5VZR4 134 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 ACTRT1Q8TDG2 376 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 U2AF1L4Q8WU68 220 aaKnown RBP12.99□□□□□ -0.33
PRPF39-203ENST00000477626 NLRP7Q8WX94 980 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 LHX5Q9H2C1 402 aa12.99□□□□□ -0.33
PRPF39-203ENST00000477626 PAK6Q9NQU5 681 aaPredicted RBP12.99□□□□□ -0.33
PRPF39-203ENST00000477626 FTLP02792 175 aaPredicted RBP12.98□□□□□ -0.33
PRPF39-203ENST00000477626 MYL3P08590 195 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 TNNI1P19237 187 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 CXCL17Q6UXB2 119 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 SEC14L1Q92503 715 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 RABGGTAQ92696 567 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 TSEN34Q9BSV6 310 aaKnown RBP12.98□□□□□ -0.33
PRPF39-203ENST00000477626 GOLPH3Q9H4A6 298 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 C1orf112Q9NSG2 853 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 GDAP2Q9NXN4 497 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 SPTLC1O15269 473 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 URI1O94763 535 aaPredicted RBP12.98□□□□□ -0.33
PRPF39-203ENST00000477626 H2AFZP0C0S5 128 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 CTNNA2P26232 953 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 LRPAP1P30533 357 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 ELF2Q15723 593 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 H2AFVQ71UI9 128 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 RBBP8NLQ8NC74 664 aaPredicted RBP12.98□□□□□ -0.33
PRPF39-203ENST00000477626 VCPIP1Q96JH7 1222 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 PPP1R16BQ96T49 567 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
PRPF39-203ENST00000477626 TUBGCP4Q9UGJ1 667 aa12.98□□□□□ -0.33
PRPF39-203ENST00000477626 KIF4AO95239 1232 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 TMEM62Q0P6H9 643 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 WDR93Q6P2C0 686 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 FBXO38Q6PIJ6 1188 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 ZNF598Q86UK7 904 aaKnown RBP12.97□□□□□ -0.33
PRPF39-203ENST00000477626 THNSL1Q8IYQ7 743 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 ALG3Q92685 438 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 FNBP1Q96RU3 617 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 SMYD3Q9H7B4 428 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 AGO3Q9H9G7 860 aaKnown RBP12.97□□□□□ -0.33
PRPF39-203ENST00000477626 RPF1Q9H9Y2 349 aaKnown RBP12.97□□□□□ -0.33
PRPF39-203ENST00000477626 PHF24Q9UPV7 400 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 SQORQ9Y6N5 450 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 CCDC172P0C7W6 258 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 NOTUMQ6P988 496 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 ZNF606Q8WXB4 792 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 LINC01599Q8WXQ3 324 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 MAP7D2Q96T17 732 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 IPPQ9Y573 584 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 PCDHA3Q9Y5H8 950 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 LSM8O95777 96 aaKnown RBP12.97□□□□□ -0.33
PRPF39-203ENST00000477626 PAEPP09466 180 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 DNTTIP2Q5QJE6 756 aaKnown RBP12.97□□□□□ -0.33
PRPF39-203ENST00000477626 AP5M1Q9H0R1 490 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 EPC1Q9H2F5 836 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 DEF6Q9H4E7 631 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 SNTG2Q9NY99 539 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 EHD2Q9NZN4 543 aa12.97□□□□□ -0.33
PRPF39-203ENST00000477626 MEIS3P2A8K0S8 358 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 TRPA1O75762 1119 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 CD4P01730 458 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 TNFRSF8P28908 595 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 ECHS1P30084 290 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 CTNNA1P35221 906 aaKnown RBP12.96□□□□□ -0.33
PRPF39-203ENST00000477626 GUCY2FP51841 1108 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 CYP4V2Q6ZWL3 525 aaPredicted RBP12.96□□□□□ -0.33
PRPF39-203ENST00000477626 LRRC52Q8N7C0 313 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 CYFIP2Q96F07 1278 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 RPS6KC1Q96S38 1066 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.96□□□□□ -0.33
PRPF39-203ENST00000477626 CAND2O75155 1236 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 EFEMP2O95967 443 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 PTK7Q13308 1070 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 FBXO47Q5MNV8 452 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 C9orf57Q5W0N0 161 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 BNIPLQ7Z465 357 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 ANKS1BQ7Z6G8 1248 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 C18orf25Q96B23 403 aaPredicted RBP12.96□□□□□ -0.33
PRPF39-203ENST00000477626 CYP3A43Q9HB55 503 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 RNF19AQ9NV58 838 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 TSKSQ9UJT2 592 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 TRPV2Q9Y5S1 764 aa12.96□□□□□ -0.33
PRPF39-203ENST00000477626 TACC1O75410 805 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms