RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 TRMT1LQ7Z2T5 733 aaKnown RBP19.19■□□□□ 0.66
CCM2-209ENST00000477605 SPATA21Q7Z572 469 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 NSUN6Q8TEA1 469 aaKnown RBP19.19■□□□□ 0.66
CCM2-209ENST00000477605 RBM41Q96IZ5 413 aaKnown RBP19.19■□□□□ 0.66
CCM2-209ENST00000477605 TTC25Q96NG3 672 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 POLR3FQ9H1D9 316 aaPredicted RBP19.19■□□□□ 0.66
CCM2-209ENST00000477605 PPCSQ9HAB8 311 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 PARVAQ9NVD7 372 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 FGFR1OP2Q9NVK5 253 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 IP6K2Q9UHH9 426 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 NAALADL1Q9UQQ1 740 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 SLC18A1P54219 525 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 TNFAIP1Q13829 316 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 ZNF268Q14587 947 aaPredicted RBP19.18■□□□□ 0.66
CCM2-209ENST00000477605 TRIP13Q15645 432 aaPredicted RBP19.18■□□□□ 0.66
CCM2-209ENST00000477605 TDRD10Q5VZ19 366 aaKnown RBP19.18■□□□□ 0.66
CCM2-209ENST00000477605 CFAP57Q96MR6 1250 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 RPAP3Q9H6T3 665 aaPredicted RBP19.18■□□□□ 0.66
CCM2-209ENST00000477605 RNF146Q9NTX7 359 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 EURLQ9NYK6 297 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 PRKAG3Q9UGI9 489 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 AGO2Q9UKV8 859 aaKnown RBP19.18■□□□□ 0.66
CCM2-209ENST00000477605 STX2P32856 288 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 MCL1Q07820 350 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 LRRC14Q15048 493 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 NUGGCQ68CJ6 796 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 TDRPQ86YL5 185 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 FEZF2Q8TBJ5 459 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 JPH1Q9HDC5 661 aaPredicted RBP19.18■□□□□ 0.66
CCM2-209ENST00000477605 ABCF3Q9NUQ8 709 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 SLC9A2Q9UBY0 812 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 PCDHB4Q9Y5E5 795 aa19.18■□□□□ 0.66
CCM2-209ENST00000477605 FER1L6Q2WGJ9 1857 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 GNA15P30679 374 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 SOX10P56693 466 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 TAS2R40P59535 323 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 COPS2P61201 443 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 PRKCEQ02156 737 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 BNIP1Q12981 228 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 ACVR2BQ13705 512 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 LLGL1Q15334 1064 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 RNF43Q68DV7 783 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 MIS18BP1Q6P0N0 1132 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 ABHD15Q6UXT9 468 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 ANKS1BQ7Z6G8 1248 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 NIM1KQ8IY84 436 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 MGARPQ8TDB4 240 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 C11orf70Q9BRQ4 267 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 HEMGNQ9BXL5 484 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 RXFP1Q9HBX9 757 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 SEPT9Q9UHD8 586 aaPredicted RBP19.17■□□□□ 0.66
CCM2-209ENST00000477605 MCM8Q9UJA3 840 aa19.17■□□□□ 0.66
CCM2-209ENST00000477605 DRG1Q9Y295 367 aaKnown RBP19.17■□□□□ 0.66
CCM2-209ENST00000477605 TLR3O15455 904 aaKnown RBP19.16■□□□□ 0.66
CCM2-209ENST00000477605 UBOX5O94941 541 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 VNN1O95497 513 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 CLTAP09496 248 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 CREB1P16220 341 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 DSG3P32926 999 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 MAGEA4P43358 317 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 CCDC15Q0P6D6 951 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 NFX1Q12986 1120 aaKnown RBP19.16■□□□□ 0.66
CCM2-209ENST00000477605 FAM133BQ5BKY9 247 aaKnown RBP19.16■□□□□ 0.66
CCM2-209ENST00000477605 ANKRD42Q8N9B4 389 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 CGRRF1Q99675 332 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 NOD2Q9HC29 1040 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 ZNF277Q9NRM2 450 aaPredicted RBP19.16■□□□□ 0.66
CCM2-209ENST00000477605 TJP3O95049 919 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 CALCAP01258 141 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 NQO1P15559 274 aaKnown RBP19.16■□□□□ 0.66
CCM2-209ENST00000477605 PTPN7P35236 360 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 SKIV2L2P42285 1042 aaKnown RBP19.16■□□□□ 0.66
CCM2-209ENST00000477605 AP3M2P53677 418 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 IL9RQ01113 521 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 MPP2Q14168 576 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 RASA2Q15283 850 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 TEPSINQ96N21 525 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 TGS1Q96RS0 853 aaKnown RBP19.16■□□□□ 0.66
CCM2-209ENST00000477605 SENP1Q9P0U3 644 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 CTNNAL1Q9UBT7 734 aa19.16■□□□□ 0.66
CCM2-209ENST00000477605 LIASO43766 372 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 NAMPTP43490 491 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 ACTR2P61160 394 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 NCALDP61601 193 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 MTFR1Q15390 333 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 EAPPQ56P03 285 aaPredicted RBP19.15■□□□□ 0.66
CCM2-209ENST00000477605 GSTA5Q7RTV2 222 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 RBBP8NLQ8NC74 664 aaPredicted RBP19.15■□□□□ 0.66
CCM2-209ENST00000477605 MAML1Q92585 1016 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 RBM15Q96T37 977 aaKnown RBP eCLIP19.15■□□□□ 0.66
CCM2-209ENST00000477605 MYOZ2Q9NPC6 264 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 KLHL14Q9P2G3 628 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 SPATA31C2B4DYI2 1134 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 DNALI1O14645 258 aaPredicted RBP19.15■□□□□ 0.66
CCM2-209ENST00000477605 MAGEB2O15479 319 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 LSM8O95777 96 aaKnown RBP19.15■□□□□ 0.66
CCM2-209ENST00000477605 CALB1P05937 261 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 NLRP11P59045 1033 aaKnown RBP19.15■□□□□ 0.66
CCM2-209ENST00000477605 IRX3P78415 501 aaPredicted RBP19.15■□□□□ 0.66
CCM2-209ENST00000477605 TAP1Q03518 808 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms