RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 DPP3Q9NY33 737 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 RBAKQ9NYW8 714 aaPredicted RBP19.11■□□□□ 0.65
PTPN7-209ENST00000477554 HSPBP1Q9NZL4 362 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 PCDHB8Q9UN66 801 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 BACE2Q9Y5Z0 518 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 DOCK8Q8NF50 2099 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 WDFY4Q6ZS81 3184 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 EIF3DO15371 548 aaKnown RBP eCLIP19.1■□□□□ 0.65
PTPN7-209ENST00000477554 DCXO43602 365 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 TRAPPC3O43617 180 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 EXTL3O43909 919 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 KINO60870 393 aaKnown RBP19.1■□□□□ 0.65
PTPN7-209ENST00000477554 C8AP07357 584 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 ALCAMQ13740 583 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 POSTNQ15063 836 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 POTEHQ6S545 545 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 ANKS3Q6ZW76 656 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 RDH13Q8NBN7 331 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 BEST2Q8NFU1 509 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 CMASQ8NFW8 434 aaPredicted RBP19.1■□□□□ 0.65
PTPN7-209ENST00000477554 OR5B17Q8NGF7 314 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 ERCC4Q92889 916 aaPredicted RBP19.1■□□□□ 0.65
PTPN7-209ENST00000477554 BORCS6Q96GS4 357 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 CCDC34Q96HJ3 373 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 TIGD1Q96MW7 591 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 CRISPLD1Q9H336 500 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 ASB7Q9H672 318 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 TMEM206Q9H813 350 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 C2CD2Q9Y426 696 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 TECTAO75443 2155 aa19.1■□□□□ 0.65
PTPN7-209ENST00000477554 PVALEFA0A1B0GWK0 134 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 SYN3O14994 580 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 PAPLNO95428 1278 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 CYP2J2P51589 502 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 TFAMQ00059 246 aaKnown RBP19.09■□□□□ 0.65
PTPN7-209ENST00000477554 CREMQ03060 361 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 CTXN3Q4LDR2 81 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 SLC8B1Q6J4K2 584 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 C15orf39Q6ZRI6 1047 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 GPD1LQ8N335 351 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 C1orf127Q8N9H9 656 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 SENP8Q96LD8 212 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 NECTIN4Q96NY8 510 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 MYADMQ96S97 322 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 RTP3Q9BQQ7 232 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 PRKD2Q9BZL6 878 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 PLEKHA4Q9H4M7 779 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 LIMD1Q9UGP4 676 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 SIX4Q9UIU6 781 aa19.09■□□□□ 0.65
PTPN7-209ENST00000477554 ABLIM3O94929 683 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 DPYDQ12882 1025 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 BMT2Q1RMZ1 405 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 DSTYKQ6XUX3 929 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 RNF19BQ6ZMZ0 732 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 KRBA2Q6ZNG9 492 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 GRASPQ7Z6J2 395 aaPredicted RBP19.08■□□□□ 0.65
PTPN7-209ENST00000477554 CD302Q8IX05 232 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 PLEKHO2Q8TD55 490 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 SYAP1Q96A49 352 aaPredicted RBP19.08■□□□□ 0.65
PTPN7-209ENST00000477554 LRFN3Q9BTN0 628 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 MTMR12Q9C0I1 747 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 WDR6Q9NNW5 1121 aaKnown RBP19.08■□□□□ 0.65
PTPN7-209ENST00000477554 DERAQ9Y315 318 aa19.08■□□□□ 0.65
PTPN7-209ENST00000477554 CLUHO75153 1309 aa19.08■□□□□ 0.64
PTPN7-209ENST00000477554 HCRTO43612 131 aa19.08■□□□□ 0.64
PTPN7-209ENST00000477554 RPN1P04843 607 aaKnown RBP19.08■□□□□ 0.64
PTPN7-209ENST00000477554 POLR2BP30876 1174 aaKnown RBP19.08■□□□□ 0.64
PTPN7-209ENST00000477554 TTC9BQ8N6N2 239 aa19.08■□□□□ 0.64
PTPN7-209ENST00000477554 OR10T2Q8NGX3 314 aa19.08■□□□□ 0.64
PTPN7-209ENST00000477554 RSAD2Q8WXG1 361 aa19.08■□□□□ 0.64
PTPN7-209ENST00000477554 ELMO3Q96BJ8 720 aa19.08■□□□□ 0.64
PTPN7-209ENST00000477554 PGLYRP2Q96PD5 576 aa19.08■□□□□ 0.64
PTPN7-209ENST00000477554 IL18RAPO95256 599 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 ITGB3P05106 788 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 CASP4P49662 377 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 CCDC142Q17RM4 750 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 PPM1LQ5SGD2 360 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 CCDC149Q6ZUS6 474 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 ELOA2Q8IYF1 753 aaPredicted RBP19.07■□□□□ 0.64
PTPN7-209ENST00000477554 ITFG1Q8TB96 612 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 HDAC7Q8WUI4 952 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 EXOC1Q9NV70 894 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 ZDHHC7Q9NXF8 308 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 HOOK1Q9UJC3 728 aaKnown RBP19.07■□□□□ 0.64
PTPN7-209ENST00000477554 POLIQ9UNA4 740 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 MAPK8IP1Q9UQF2 711 aa19.07■□□□□ 0.64
PTPN7-209ENST00000477554 XPOTO43592 962 aaKnown RBP19.06■□□□□ 0.64
PTPN7-209ENST00000477554 SOAT2O75908 522 aa19.06■□□□□ 0.64
PTPN7-209ENST00000477554 OAZ2O95190 189 aa19.06■□□□□ 0.64
PTPN7-209ENST00000477554 YWHAHQ04917 246 aaPredicted RBP19.06■□□□□ 0.64
PTPN7-209ENST00000477554 ADCY1Q08828 1119 aa19.06■□□□□ 0.64
PTPN7-209ENST00000477554 PNOCQ13519 176 aa19.06■□□□□ 0.64
PTPN7-209ENST00000477554 KNOP1Q1ED39 458 aaKnown RBP19.06■□□□□ 0.64
PTPN7-209ENST00000477554 WSCD1Q658N2 575 aa19.06■□□□□ 0.64
PTPN7-209ENST00000477554 ZNF280DQ6N043 979 aa19.06■□□□□ 0.64
PTPN7-209ENST00000477554 PDXDC1Q6P996 788 aa19.06■□□□□ 0.64
PTPN7-209ENST00000477554 GET4Q7L5D6 327 aaPredicted RBP19.06■□□□□ 0.64
PTPN7-209ENST00000477554 SMYD4Q8IYR2 804 aaPredicted RBP19.06■□□□□ 0.64
PTPN7-209ENST00000477554 TDRD5Q8NAT2 981 aaKnown RBP19.06■□□□□ 0.64
PTPN7-209ENST00000477554 ZNF461Q8TAF7 563 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms