RNA–Protein interactions for RNA: ENST00000477345.1

TPRN-203, Transcript of taperin, humanhuman

TSL 1 (best)

Gene TPRN, Length 3,350 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-203ENST00000477345 KCTD10Q9H3F6 313 aa13.68□□□□□ -0.22
TPRN-203ENST00000477345 TDRD3Q9H7E2 651 aaKnown RBP13.68□□□□□ -0.22
TPRN-203ENST00000477345 RXFP1Q9HBX9 757 aa13.68□□□□□ -0.22
TPRN-203ENST00000477345 CCDC195A0A1B0GUA6 201 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 DDX3YO15523 660 aaKnown RBP13.67□□□□□ -0.22
TPRN-203ENST00000477345 BBOX1O75936 387 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 RAD17O75943 681 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 PCP11498 1178 aaKnown RBP13.67□□□□□ -0.22
TPRN-203ENST00000477345 FMO5P49326 533 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 RHBDL3P58872 404 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 CDR2Q01850 454 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 STRN3Q13033 797 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 EPHA7Q15375 998 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 AOC3Q16853 763 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 SNX30Q5VWJ9 437 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 DEPTORQ8TB45 409 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 MAML1Q92585 1016 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 CRAMP1Q96RY5 1269 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 SMC6Q96SB8 1091 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 ANO3Q9BYT9 981 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 RABL2BQ9UNT1 228 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 ITM2BQ9Y287 266 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 TCP10L2B9ZVM9 353 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 CYP1A1P04798 512 aaPredicted RBP13.67□□□□□ -0.22
TPRN-203ENST00000477345 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
TPRN-203ENST00000477345 MGAT5Q09328 741 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 GIT2Q14161 759 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 TTC17Q96AE7 1141 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 CCDC124Q96CT7 223 aaKnown RBP13.67□□□□□ -0.22
TPRN-203ENST00000477345 OLFM3Q96PB7 478 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 JMJD4Q9H9V9 463 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 TCEAL9Q9UHQ7 104 aa13.67□□□□□ -0.22
TPRN-203ENST00000477345 SYNGAP1Q96PV0 1343 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 MAPK13O15264 365 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 GYG2O15488 501 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 GAS8O95995 478 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 CETPP11597 493 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 GM2AP17900 193 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 SMARCA1P28370 1054 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 GALK1P51570 392 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 KDSRQ06136 332 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 RRP1BQ14684 758 aaKnown RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 SMUG1Q53HV7 270 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 LRRC43Q8N309 656 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 ENDOVQ8N8Q3 282 aaKnown RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 UTP4Q969X6 686 aaKnown RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 FAM161BQ96MY7 647 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 RUNDC3BQ96NL0 473 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 AGPAT1Q99943 283 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 PI4K2AQ9BTU6 479 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 DCLRE1BQ9H816 532 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 PARP2Q9UGN5 583 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 SYNPO2Q9UMS6 1093 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 K7ENM7 598 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 STK10O94804 968 aaKnown RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 UNC5CO95185 931 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 VAV1P15498 845 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 MAPK4P31152 587 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 RTP1P59025 263 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 CETN1Q12798 172 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 SBK1Q52WX2 424 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 VSTM1Q6UX27 236 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 SLC47A2Q86VL8 602 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 RIBC1Q8N443 379 aaPredicted RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 CPA5Q8WXQ8 436 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 GATA6Q92908 595 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 NMD3Q96D46 503 aaKnown RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 USP20Q9Y2K6 914 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 NID2Q14112 1375 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 KDM3AQ9Y4C1 1321 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 FAM187AA6NFU0 413 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 A6NJR5 290 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 PODXLO00592 558 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 ATP9BO43861 1147 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 RARGP13631 454 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 ETS1P14921 441 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 ATP5DP30049 168 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 DHX34Q14147 1143 aaKnown RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 PHLDB3Q6NSJ2 640 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 SLC13A5Q86YT5 568 aaPredicted RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 ZSWIM2Q8NEG5 633 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 CLIP3Q96DZ5 547 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 SPZ1Q9BXG8 430 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 DENND2DQ9H6A0 471 aaPredicted RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 SMYD3Q9H7B4 428 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 FBXO6Q9NRD1 293 aaPredicted RBP13.66□□□□□ -0.22
TPRN-203ENST00000477345 BTBD7Q9P203 1132 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 SERPINB13Q9UIV8 391 aa13.66□□□□□ -0.22
TPRN-203ENST00000477345 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 MAGEB3O15480 346 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 LMNAP02545 664 aaKnown RBP13.65□□□□□ -0.22
TPRN-203ENST00000477345 KRT10P13645 584 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 GPC5P78333 572 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 KHDC1Q4VXA5 237 aaKnown RBP13.65□□□□□ -0.22
TPRN-203ENST00000477345 CDC42EP5Q6NZY7 148 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 ARHGEF19Q8IW93 802 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 ZBED8Q8IZ13 594 aa13.65□□□□□ -0.22
TPRN-203ENST00000477345 AGGF1Q8N302 714 aaeCLIP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms