RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 USP46P62068 366 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 RCN1Q15293 331 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 CCDC142Q17RM4 750 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 SGSM1Q2NKQ1 1148 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 LLGL2Q6P1M3 1020 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 SLC39A4Q6P5W5 647 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 DEFB132Q7Z7B7 95 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 CACTIN-AS1Q8N1I8 211 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 PDGFDQ9GZP0 370 aaPredicted RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 WASF2Q9Y6W5 498 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 CNTNAP1P78357 1384 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 KIAA1217Q5T5P2 1943 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 NVLO15381 856 aaKnown RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 HLA-DOAP06340 250 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 EN1Q05925 392 aaPredicted RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 DEUP1Q05D60 604 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 UGCGQ16739 394 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 DAB2IPQ5VWQ8 1189 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 SLCO2A1Q92959 643 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 SH2D3AQ9BRG2 576 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 LXNQ9BS40 222 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 GLIS2Q9BZE0 524 aaPredicted RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 PHACTR1Q9C0D0 580 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 PCIF1Q9H4Z3 704 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 UBE2TQ9NPD8 197 aaPredicted RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 BPTFQ12830 3046 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 TBCAO75347 108 aaKnown RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 AGTP01019 485 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 ACADSP16219 412 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 GCAP28676 217 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 COILP38432 576 aaPredicted RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 WNT7BP56706 349 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 CNPY1Q3B7I2 92 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 PABPC1LQ4VXU2 614 aaKnown RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 SNX30Q5VWJ9 437 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 CCDC137Q6PK04 289 aaKnown RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 COL23A1Q86Y22 540 aaPredicted RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 C12orf56Q8IXR9 622 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.89□□□□□ -0.99
VAPB-205ENST00000476395 CTNNBL1Q8WYA6 563 aaPredicted RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 PRR11Q96HE9 360 aaPredicted RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 DEFB129Q9H1M3 183 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.89□□□□□ -0.99
VAPB-205ENST00000476395 PGAP2Q9UHJ9 254 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 TELO2Q9Y4R8 837 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 A6NJR5 290 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 SPAG7O75391 227 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 GCLMP48507 274 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 ABCB5Q2M3G0 1257 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 ODR4Q5SWX8 454 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 SLC13A5Q86YT5 568 aaPredicted RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 LRRC19Q9H756 370 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 KLHL14Q9P2G3 628 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 COL11A1P12107 1806 aaPredicted RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 MROH7Q68CQ1 1323 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 GOLGA6L10A0A0M3HER8 536 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 YDJCA8MPS7 323 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 PMM2O15305 246 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 FAM13AO94988 1023 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 CHRNA3P32297 505 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 FAM178BQ8IXR5 827 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 SRRM1Q8IYB3 904 aaKnown RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 C7orf43Q8WVR3 580 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 SHC3Q92529 594 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 PMM1Q92871 262 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 PRMT6Q96LA8 375 aaPredicted RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 CHST7Q9NS84 486 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 SEL1LQ9UBV2 794 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 R3HDM2Q9Y2K5 976 aaKnown RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 LOC285556D6RIA3 1793 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 TMEM110-MUSTN1A8MSY1 372 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 TBX10O75333 385 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 TJP3O95049 919 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 CFHP08603 1231 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 RARGP13631 454 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 BRAFP15056 766 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 TRIP13Q15645 432 aaPredicted RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 CEP55Q53EZ4 464 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 RASIP1Q5U651 963 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 RBBP8NLQ8NC74 664 aaPredicted RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 FLAD1Q8NFF5 587 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 WDR60Q8WVS4 1066 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 C17orf50Q8WW18 174 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 DHX38Q92620 1227 aaKnown RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 TUBGCP5Q96RT8 1024 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 CDC42EP4Q9H3Q1 356 aaKnown RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 TDRD3Q9H7E2 651 aaKnown RBP8.88□□□□□ -0.99
VAPB-205ENST00000476395 SCOCQ9UIL1 159 aa8.88□□□□□ -0.99
VAPB-205ENST00000476395 SYNGAP1Q96PV0 1343 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 FSCN2O14926 492 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 OR6B1O95007 311 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 TAC1P20366 129 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 BDNFP23560 247 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 MRPS9P82933 396 aaKnown RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 GTF2BQ00403 316 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 KLF1Q13351 362 aaPredicted RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 KPNB1Q14974 876 aaKnown RBP8.87□□□□□ -0.99
VAPB-205ENST00000476395 ACSBG2Q5FVE4 666 aa8.87□□□□□ -0.99
VAPB-205ENST00000476395 C6orf118Q5T5N4 469 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms