RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 FAM86C2PA6NEL3 165 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 C2CD4DB7Z1M9 353 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 FAM189A1O60320 539 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZMYND10O75800 440 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 PPP1R37O75864 691 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 GCNT3O95395 438 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 SP100P23497 879 aaPredicted RBP12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 LRPAP1P30533 357 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 TNFSF9P41273 254 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 BRCC3P46736 316 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 RAB33AQ14088 237 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 ENOX2Q16206 610 aaKnown RBP12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 ICE2Q659A1 982 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 ADALQ6DHV7 355 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 SLC39A4Q6P5W5 647 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 STXBP4Q6ZWJ1 553 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 RTL10Q7L3V2 364 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 CCDC65Q8IXS2 484 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 SMG7Q92540 1137 aaKnown RBP12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 ACCSQ96QU6 501 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 PYM1Q9BRP8 204 aaKnown RBP12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 STRA6Q9BX79 667 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 PRKD2Q9BZL6 878 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 MAGEF1Q9HAY2 307 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 PIDD1Q9HB75 910 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 PANK4Q9NVE7 773 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 TUBGCP4Q9UGJ1 667 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 FBXW11Q9UKB1 542 aa12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 CPSF3Q9UKF6 684 aaKnown RBP12.48□□□□□ -0.41
HLA-DOB-208ENST00000475235 LACTBL1A8MY62 500 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 H7C4K7 107 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 RFPL2O75678 378 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 ADRB2P07550 413 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 HNRNPA1P09651 372 aaKnown RBP eCLIP12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 SPATA31D3P0C874 917 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 PAX3P23760 479 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 TKTP29401 623 aaKnown RBP12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 HOXA9P31269 272 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 MCM4P33991 863 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 OR1D2P34982 312 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 ME1P48163 572 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZXDAP98168 799 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 PKP1Q13835 747 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZBTB6Q15916 424 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 E2F4Q16254 413 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 SHC4Q6S5L8 630 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 SPATA31D4Q6ZUB0 917 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 APPL2Q8NEU8 664 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 SUSD3Q96L08 255 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 ASB7Q9H672 318 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 WDR6Q9NNW5 1121 aaKnown RBP12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 KBTBD4Q9NVX7 518 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 AGO2Q9UKV8 859 aaKnown RBP12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 DERAQ9Y315 318 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 HCN4Q9Y3Q4 1203 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 CDY1Q9Y6F8 540 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 TDRD15B5MCY1 1934 aaKnown RBP12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 ANKRD63C9JTQ0 380 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 I3L4J1 428 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 C8AP07357 584 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 IGFBP6P24592 240 aaPredicted RBP12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 MTMR3Q13615 1198 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 PPM1LQ5SGD2 360 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 VARS2Q5ST30 1063 aaKnown RBP12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZBTB41Q5SVQ8 909 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 SLC8B1Q6J4K2 584 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 KLHL10Q6JEL2 608 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 TRIM67Q6ZTA4 783 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 BEST2Q8NFU1 509 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 POMGNT1Q8WZA1 660 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 DHX58Q96C10 678 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZNF707Q96C28 371 aaPredicted RBP12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 OXCT2Q9BYC2 517 aaPredicted RBP12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 TRIM9Q9C026 710 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 TBC1D7Q9P0N9 293 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 SORCS3Q9UPU3 1222 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 C2CD2Q9Y426 696 aa12.47□□□□□ -0.41
HLA-DOB-208ENST00000475235 CLUHO75153 1309 aa12.46□□□□□ -0.41
HLA-DOB-208ENST00000475235 ADAM12O43184 909 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 XYLBO75191 536 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 LDHAP00338 332 aaKnown RBP12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 POU2F2P09086 479 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 MYBP10242 640 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 TIE1P35590 1138 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 TNNT3P45378 269 aaPredicted RBP12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 NOP2P46087 812 aaKnown RBP12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 ACOT2P49753 483 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 SARNPP82979 210 aaKnown RBP12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 DNM1Q05193 864 aaKnown RBP12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 SPAG1Q07617 926 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 SIGLEC14Q08ET2 396 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 TMEM132DQ14C87 1099 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 SPATA1Q5VX52 437 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 CNNM4Q6P4Q7 775 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 SYCP3Q8IZU3 236 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 IRF2BPLQ9H1B7 796 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms