RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 VCAM1P19320 739 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 TPP2P29144 1249 aaPredicted RBP10.15□□□□□ -0.78
CDH23-211ENST00000475158 ABCD1P33897 745 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 ITGA8P53708 1063 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 SV2AQ7L0J3 742 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 ENOSF1Q7L5Y1 443 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 KIF2BQ8N4N8 673 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 TMX2Q9Y320 296 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 RCCD1A6NED2 376 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 TRPA1O75762 1119 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 PSEN1P49768 467 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 ROR1Q01973 937 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 EMC1Q8N766 993 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 TTC13Q8NBP0 860 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 USP33Q8TEY7 942 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 UVRAGQ9P2Y5 699 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 LRFN2Q9ULH4 789 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 NEU2Q9Y3R4 380 aa10.15□□□□□ -0.78
CDH23-211ENST00000475158 SPATA31A6Q5VVP1 1343 aa10.15□□□□□ -0.79
CDH23-211ENST00000475158 GJB6O95452 261 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 HSPA4LO95757 839 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 RFX1P22670 979 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 EFNA5P52803 228 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 IL1RL1Q01638 556 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 NT5DC1Q5TFE4 455 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 TMEM154Q6P9G4 183 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 C2orf69Q8N8R5 385 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 SYTL5Q8TDW5 730 aaPredicted RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 NUDCD1Q96RS6 583 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 PDCD2LQ9BRP1 358 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 MKNK1Q9BUB5 465 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 SPON2Q9BUD6 331 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 TRABDQ9H4I3 376 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 RMI1Q9H9A7 625 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 MRPL42Q9Y6G3 142 aaKnown RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 PDE2AO00408 941 aaPredicted RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 CASQ2O14958 399 aaPredicted RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 LPXNO60711 386 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 NOL3O60936 208 aaKnown RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 KRT38O76015 456 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 SLITRK3O94933 977 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 PMLP29590 882 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 PPATQ06203 517 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 TBX2Q13207 712 aaPredicted RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 BYSLQ13895 437 aaKnown RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 GRAMD1BQ3KR37 738 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 PPP1R2P3Q6NXS1 205 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 MMGT1Q8N4V1 131 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 OR6P1Q8NGX9 317 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 SPATA18Q8TC71 538 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 PRPF31Q8WWY3 499 aaKnown RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 SENP7Q9BQF6 1050 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 TLR10Q9BXR5 811 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 CYP26B1Q9NR63 512 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 L3MBTL1Q9Y468 752 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 IGSF9BQ9UPX0 1349 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 TMEM120BA0PK00 339 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 F8VZ95 297 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 EIF3DO15371 548 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDH23-211ENST00000475158 ITGB3P05106 788 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 ARL13BQ3SXY8 428 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 PAN2Q504Q3 1202 aaKnown RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 ATF7IP2Q5U623 682 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 IL31Q6EBC2 164 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 CRLF3Q8IUI8 442 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 ATP11CQ8NB49 1132 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 CDC26Q8NHZ8 85 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 EPS8L3Q8TE67 593 aaKnown RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 TRAPPC12Q8WVT3 735 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 HNRNPLLQ8WVV9 542 aaKnown RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 SLC35C1Q96A29 364 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 TTC1Q99614 292 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 TXLNGQ9NUQ3 528 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 GON4LQ3T8J9 2241 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 SDK1Q7Z5N4 2213 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 FAM153BP0C7A2 387 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 TYK2P29597 1187 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 RARRES1P49788 294 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 TNFAIP2Q03169 654 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 FAM153CQ494X1 144 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 SH3RF1Q7Z6J0 888 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 FBXO16Q8IX29 292 aaPredicted RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 OR6J1Q8NGC5 347 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 HAS1Q92839 578 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 STAMBPL1Q96FJ0 436 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 GCOM2Q9BZD3 368 aaPredicted RBP10.14□□□□□ -0.79
CDH23-211ENST00000475158 FAM153AQ9UHL3 310 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 ZFP69BQ9UJL9 534 aa10.14□□□□□ -0.79
CDH23-211ENST00000475158 WNT10BO00744 389 aa10.13□□□□□ -0.79
CDH23-211ENST00000475158 FDX1P10109 184 aa10.13□□□□□ -0.79
CDH23-211ENST00000475158 CYP11B1P15538 503 aa10.13□□□□□ -0.79
CDH23-211ENST00000475158 OCRLQ01968 901 aa10.13□□□□□ -0.79
CDH23-211ENST00000475158 KLC1Q07866 573 aa10.13□□□□□ -0.79
CDH23-211ENST00000475158 PAPD7Q5XG87 772 aaKnown RBP10.13□□□□□ -0.79
CDH23-211ENST00000475158 OLFML2BQ68BL8 750 aa10.13□□□□□ -0.79
CDH23-211ENST00000475158 TRIM72Q6ZMU5 477 aa10.13□□□□□ -0.79
CDH23-211ENST00000475158 SLC13A5Q86YT5 568 aaPredicted RBP10.13□□□□□ -0.79
CDH23-211ENST00000475158 ALKBH8Q96BT7 664 aaKnown RBP10.13□□□□□ -0.79
CDH23-211ENST00000475158 ZBTB45Q96K62 511 aaPredicted RBP10.13□□□□□ -0.79
CDH23-211ENST00000475158 VIPAS39Q9H9C1 493 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms