RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 CDC25BP30305 580 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 PIK3CAP42336 1068 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 GATMP50440 423 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 WDR5P61964 334 aaKnown RBP10.25□□□□□ -0.77
DDX39B-217ENST00000474961 SOX4Q06945 474 aaPredicted RBP10.25□□□□□ -0.77
DDX39B-217ENST00000474961 TRPC3Q13507 836 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 NCOA4Q13772 614 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 NOMO2Q5JPE7 1267 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 PRPF38BQ5VTL8 546 aaKnown RBP10.25□□□□□ -0.77
DDX39B-217ENST00000474961 DPY19L2P1Q6NXN4 242 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 PSRC1Q6PGN9 363 aaPredicted RBP10.25□□□□□ -0.77
DDX39B-217ENST00000474961 OTOP2Q7RTS6 562 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 TMC6Q7Z403 805 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.25□□□□□ -0.77
DDX39B-217ENST00000474961 DRC7Q8IY82 874 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 FBXL13Q8NEE6 735 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 LMO3Q8TAP4 145 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 URGCPQ8TCY9 931 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 CASD1Q96PB1 797 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
DDX39B-217ENST00000474961 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.25□□□□□ -0.776e-10■■■□□ 16.8
DDX39B-217ENST00000474961 INTS2Q9H0H0 1204 aaKnown RBP10.25□□□□□ -0.77
DDX39B-217ENST00000474961 SLC38A7Q9NVC3 462 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 RAB20Q9NX57 234 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 SIX4Q9UIU6 781 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 NR2E3Q9Y5X4 410 aa10.25□□□□□ -0.77
DDX39B-217ENST00000474961 ITGB3P05106 788 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 KRT19P08727 400 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 POLR2BP30876 1174 aaKnown RBP10.24□□□□□ -0.77
DDX39B-217ENST00000474961 KCNJ6P48051 423 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 DEFB103AP81534 67 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 RBP5P82980 135 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 APBA1Q02410 837 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 GRIK3Q13003 919 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 NAB2Q15742 525 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 SPECC1LQ69YQ0 1117 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 TRIM65Q6PJ69 517 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 ABI1Q8IZP0 508 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 NEK11Q8NG66 645 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 CXorf38Q8TB03 319 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 TOP1MTQ969P6 601 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 ELMO3Q96BJ8 720 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 PI4K2AQ9BTU6 479 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 GOLGA2P5Q9HBQ8 144 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 SIX2Q9NPC8 291 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 PLCB1Q9NQ66 1216 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.24□□□□□ -0.771e-6■■□□□ 14.4
DDX39B-217ENST00000474961 KANSL3Q9P2N6 904 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 ITGA11Q9UKX5 1188 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 AGAP1Q9UPQ3 857 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 ITIH6Q6UXX5 1313 aa10.24□□□□□ -0.77
DDX39B-217ENST00000474961 COL4A6Q14031 1691 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 ANO9A1A5B4 782 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 TBKBP1A7MCY6 615 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 ZBBXA8MT70 800 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 PPEF2O14830 753 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 TNRC18O15417 2968 aaPredicted RBP10.23□□□□□ -0.77
DDX39B-217ENST00000474961 NOL4O94818 638 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 S1PR4O95977 384 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 LRPAP1P30533 357 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 MYL6P60660 151 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 GUCA2AQ02747 115 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 LRMPQ12912 555 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 TUSC3Q13454 348 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 SGSM1Q2NKQ1 1148 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 WDR44Q5JSH3 913 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 KLHDC7AQ5VTJ3 777 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 C9orf57Q5W0N0 161 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 GJB7Q6PEY0 223 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 RNF19BQ6ZMZ0 732 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 TMCO2Q7Z6W1 182 aaPredicted RBP10.23□□□□□ -0.77
DDX39B-217ENST00000474961 SPC24Q8NBT2 197 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 CCDC150Q8NCX0 1101 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 HERVK_113Q902F9 699 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 HLA-CQ95604 372 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 NUP58Q9BVL2 599 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 GANQ9H2C0 597 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 APOBEC3GQ9HC16 384 aaKnown RBP10.23□□□□□ -0.77
DDX39B-217ENST00000474961 FAM207AQ9NSI2 230 aaPredicted RBP10.23□□□□□ -0.77
DDX39B-217ENST00000474961 TBC1D13Q9NVG8 400 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 CACNG4Q9UBN1 327 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 R3HCC1Q9Y3T6 440 aaKnown RBP10.23□□□□□ -0.77
DDX39B-217ENST00000474961 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.23□□□□□ -0.773e-10■□□□□ 9.2
DDX39B-217ENST00000474961 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.23□□□□□ -0.77
DDX39B-217ENST00000474961 PDE4DIPQ5VU43 2346 aa10.23□□□□□ -0.77
DDX39B-217ENST00000474961 KIAA1671Q9BY89 1806 aa10.22□□□□□ -0.77
DDX39B-217ENST00000474961 GBF1Q92538 1859 aa10.22□□□□□ -0.77
DDX39B-217ENST00000474961 CASTOR2A6NHX0 329 aa10.22□□□□□ -0.77
DDX39B-217ENST00000474961 PIRO00625 290 aa10.22□□□□□ -0.77
DDX39B-217ENST00000474961 EPHB6O15197 1021 aa10.22□□□□□ -0.77
DDX39B-217ENST00000474961 SPTLC1O15269 473 aa10.22□□□□□ -0.77
DDX39B-217ENST00000474961 B4GALT3O60512 393 aa10.22□□□□□ -0.77
DDX39B-217ENST00000474961 ZC3H11AO75152 810 aaKnown RBP eCLIP10.22□□□□□ -0.775e-12■■□□□ 12.8
DDX39B-217ENST00000474961 DGKIO75912 1065 aa10.22□□□□□ -0.77
DDX39B-217ENST00000474961 DDHD2O94830 711 aa10.22□□□□□ -0.77
DDX39B-217ENST00000474961 ASS1P00966 412 aaKnown RBP10.22□□□□□ -0.77
DDX39B-217ENST00000474961 TRIM21P19474 475 aaKnown RBP10.22□□□□□ -0.77
DDX39B-217ENST00000474961 ATICP31939 592 aa10.22□□□□□ -0.77
DDX39B-217ENST00000474961 RPL9P32969 192 aaKnown RBP10.22□□□□□ -0.77
DDX39B-217ENST00000474961 MAGEA10P43363 369 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms