RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 ANKMY2Q8IV38 441 aa17.29■□□□□ 0.36
TPR-205ENST00000474852 AGGF1Q8N302 714 aaeCLIP17.29■□□□□ 0.36
TPR-205ENST00000474852 CFAP57Q96MR6 1250 aa17.29■□□□□ 0.36
TPR-205ENST00000474852 ALG13Q9NP73 1137 aaKnown RBP17.29■□□□□ 0.36
TPR-205ENST00000474852 UBN1Q9NPG3 1134 aa17.29■□□□□ 0.36
TPR-205ENST00000474852 CORO1CQ9ULV4 474 aaPredicted RBP17.29■□□□□ 0.36
TPR-205ENST00000474852 ACTL7BQ9Y614 415 aa17.29■□□□□ 0.36
TPR-205ENST00000474852 MYPNQ86TC9 1320 aa17.29■□□□□ 0.36
TPR-205ENST00000474852 DENND3A2RUS2 1198 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 PROSCO94903 275 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 LUC7L3O95232 432 aaKnown RBP17.28■□□□□ 0.36
TPR-205ENST00000474852 QARSP47897 775 aaKnown RBP17.28■□□□□ 0.36
TPR-205ENST00000474852 NOP14P78316 857 aaKnown RBP17.28■□□□□ 0.36
TPR-205ENST00000474852 GPS1Q13098 491 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 CCNG2Q16589 344 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 ZCCHC9Q8N567 271 aaKnown RBP17.28■□□□□ 0.36
TPR-205ENST00000474852 AGBL1Q96MI9 1066 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 DENND2DQ9H6A0 471 aaPredicted RBP17.28■□□□□ 0.36
TPR-205ENST00000474852 COL20A1Q9P218 1284 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 ZFATQ9P243 1243 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 MRPL11Q9Y3B7 192 aaKnown RBP17.28■□□□□ 0.36
TPR-205ENST00000474852 UMODL1Q5DID0 1318 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 EDF1O60869 148 aaKnown RBP17.28■□□□□ 0.36
TPR-205ENST00000474852 IFNB1P01574 187 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 KLRC2P26717 231 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 ARSEP51690 589 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 PARP6Q2NL67 630 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 MTDHQ86UE4 582 aaKnown RBP17.28■□□□□ 0.36
TPR-205ENST00000474852 DENND1AQ8TEH3 1009 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 RIT2Q99578 217 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 KLF6Q99612 283 aaPredicted RBP17.28■□□□□ 0.36
TPR-205ENST00000474852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.28■□□□□ 0.36
TPR-205ENST00000474852 HOMER2Q9NSB8 354 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 TBX20Q9UMR3 447 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 NUMBLQ9Y6R0 609 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 LTBP1Q14766 1721 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 QSER1Q2KHR3 1735 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 GOLGA8RI6L899 631 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 DCTN3O75935 186 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 WFS1O76024 890 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 PSMC4P43686 418 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 PTDSS1P48651 473 aaKnown RBP17.28■□□□□ 0.36
TPR-205ENST00000474852 ANO7Q6IWH7 933 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 LVRNQ6Q4G3 990 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 OTOAQ7RTW8 1153 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 RHOT1Q8IXI2 618 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 SPIRE2Q8WWL2 714 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 FAM213AQ9BRX8 229 aa17.28■□□□□ 0.36
TPR-205ENST00000474852 DPPA5A6NC42 116 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 TCP10L2B9ZVM9 353 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 DSG3P32926 999 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 SLC1A1P43005 524 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 TUBP50607 506 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 EFTUD2Q15029 972 aaKnown RBP eCLIP17.27■□□□□ 0.36
TPR-205ENST00000474852 VPS72Q15906 364 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 PDK4Q16654 411 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 RFWD3Q6PCD5 774 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 CCDC125Q86Z20 511 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 BBOF1Q8ND07 529 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 C10orf82Q8WW14 230 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 MAK16Q9BXY0 300 aaKnown RBP17.27■□□□□ 0.36
TPR-205ENST00000474852 C1orf112Q9NSG2 853 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 ZFP69BQ9UJL9 534 aa17.27■□□□□ 0.36
TPR-205ENST00000474852 DHX15O43143 795 aaKnown RBP17.27■□□□□ 0.35
TPR-205ENST00000474852 KRT4P19013 534 aa17.27■□□□□ 0.35
TPR-205ENST00000474852 NPTX2P47972 431 aa17.27■□□□□ 0.35
TPR-205ENST00000474852 CCNG1P51959 295 aa17.27■□□□□ 0.35
TPR-205ENST00000474852 AP1ARQ63HQ0 302 aa17.27■□□□□ 0.35
TPR-205ENST00000474852 NLRP9Q7RTR0 991 aa17.27■□□□□ 0.35
TPR-205ENST00000474852 TCEAL9Q9UHQ7 104 aa17.27■□□□□ 0.35
TPR-205ENST00000474852 COQ4Q9Y3A0 265 aa17.27■□□□□ 0.35
TPR-205ENST00000474852 NFIBO00712 420 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 ATP5HO75947 161 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 CTCFP49711 727 aaPredicted RBP17.26■□□□□ 0.35
TPR-205ENST00000474852 PLCB3Q01970 1234 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 FAM43BQ6ZT52 329 aaPredicted RBP17.26■□□□□ 0.35
TPR-205ENST00000474852 TMEM161BQ8NDZ6 487 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.26■□□□□ 0.35
TPR-205ENST00000474852 SH3GL3Q99963 347 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 C10orf88Q9H8K7 445 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 IRF6O14896 467 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 HNRNPDLO14979 420 aaKnown RBP17.26■□□□□ 0.35
TPR-205ENST00000474852 TLR3O15455 904 aaKnown RBP17.26■□□□□ 0.35
TPR-205ENST00000474852 MAPTP10636 758 aaKnown RBP17.26■□□□□ 0.35
TPR-205ENST00000474852 ADRA1DP25100 572 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 GAD2Q05329 585 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 PLEKHG4Q58EX7 1191 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 SLC39A4Q6P5W5 647 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 APBB1IPQ7Z5R6 666 aaPredicted RBP17.26■□□□□ 0.35
TPR-205ENST00000474852 CPXCR1Q8N123 301 aa17.26■□□□□ 0.35
TPR-205ENST00000474852 PRMT6Q96LA8 375 aaPredicted RBP17.26■□□□□ 0.35
TPR-205ENST00000474852 TMX4Q9H1E5 349 aaPredicted RBP17.26■□□□□ 0.35
TPR-205ENST00000474852 ASTN2O75129 1339 aaPredicted RBP17.26■□□□□ 0.35
TPR-205ENST00000474852 A0A0G2JND7 137 aa17.25■□□□□ 0.35
TPR-205ENST00000474852 CLRN2A0PK11 232 aa17.25■□□□□ 0.35
TPR-205ENST00000474852 MAGEB2O15479 319 aa17.25■□□□□ 0.35
TPR-205ENST00000474852 ATP4AP20648 1035 aa17.25■□□□□ 0.35
TPR-205ENST00000474852 CYP24A1Q07973 514 aa17.25■□□□□ 0.35
TPR-205ENST00000474852 PDIA2Q13087 525 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms