RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SFR1Q86XK3 245 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 CCDC65Q8IXS2 484 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 DTWD2Q8NBA8 298 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 FGF14Q92915 247 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 ZNF512Q96ME7 567 aaPredicted RBP16.41■□□□□ 0.22
VARS-223ENST00000474643 MRPL44Q9H9J2 332 aaKnown RBP16.41■□□□□ 0.22
VARS-223ENST00000474643 DNMT3BQ9UBC3 853 aaKnown RBP16.41■□□□□ 0.22
VARS-223ENST00000474643 FBXL5Q9UKA1 691 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 PCDHB8Q9UN66 801 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 TRIP11Q15643 1979 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 ARHGEF37A1IGU5 675 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 KRBA1A5PL33 1030 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 ZNF197O14709 1029 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 ODC1P11926 461 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 ATF2P15336 505 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 CMA1P23946 247 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 TNFSF9P41273 254 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 ASIC1P78348 528 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 ADCY1Q08828 1119 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 E2F4Q16254 413 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 NPAS3Q8IXF0 933 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 CCDC105Q8IYK2 499 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 MCRS1Q96EZ8 462 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 OXCT2Q9BYC2 517 aaPredicted RBP16.4■□□□□ 0.22
VARS-223ENST00000474643 SLITRK6Q9H5Y7 841 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 MAGEF1Q9HAY2 307 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 SLC2A4RGQ9NR83 387 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 PANK4Q9NVE7 773 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 GDE1Q9NZC3 331 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 TBC1D7Q9P0N9 293 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 SEL1LQ9UBV2 794 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 SIT1Q9Y3P8 196 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 INSL5Q9Y5Q6 135 aa16.4■□□□□ 0.22
VARS-223ENST00000474643 TTC26A0AVF1 554 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 LACTBL1A8MY62 500 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 PI15O43692 258 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 PFKFB1P16118 471 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 NPR3P17342 541 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 CYP3A5P20815 502 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 AFMP43652 599 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 PLD1Q13393 1074 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 TMEM132DQ14C87 1099 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 ANGPT1Q15389 498 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 ENOX2Q16206 610 aaKnown RBP16.39■□□□□ 0.21
VARS-223ENST00000474643 SLFN12LQ6IEE8 588 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 ARMCX5Q6P1M9 558 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 CD300LGQ6UXG3 332 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 CLEC17AQ6ZS10 378 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 CD302Q8IX05 232 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 TCEAL8Q8IYN2 117 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 FSIP1Q8NA03 581 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 DNAJC19Q96DA6 116 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 TSPAN18Q96SJ8 248 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 ASAH2Q9NR71 780 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 AFF4Q9UHB7 1163 aaKnown RBP16.39■□□□□ 0.21
VARS-223ENST00000474643 EXOC7Q9UPT5 735 aa16.39■□□□□ 0.21
VARS-223ENST00000474643 TIMM13Q9Y5L4 95 aaPredicted RBP16.39■□□□□ 0.21
VARS-223ENST00000474643 ABLIM3O94929 683 aa16.38■□□□□ 0.21
VARS-223ENST00000474643 GCNT3O95395 438 aa16.38■□□□□ 0.21
VARS-223ENST00000474643 DCNP07585 359 aaKnown RBP16.38■□□□□ 0.21
VARS-223ENST00000474643 SYKP43405 635 aa16.38■□□□□ 0.21
VARS-223ENST00000474643 GPC5P78333 572 aa16.38■□□□□ 0.21
VARS-223ENST00000474643 TWF1Q12792 350 aa16.38■□□□□ 0.21
VARS-223ENST00000474643 SNW1Q13573 536 aaKnown RBP16.38■□□□□ 0.21
VARS-223ENST00000474643 MAP4K3Q8IVH8 894 aa16.38■□□□□ 0.21
VARS-223ENST00000474643 NOC3LQ8WTT2 800 aaKnown RBP16.38■□□□□ 0.21
VARS-223ENST00000474643 POMGNT1Q8WZA1 660 aa16.38■□□□□ 0.21
VARS-223ENST00000474643 NKD2Q969F2 451 aaPredicted RBP16.38■□□□□ 0.21
VARS-223ENST00000474643 KBTBD4Q9NVX7 518 aa16.38■□□□□ 0.21
VARS-223ENST00000474643 SERTAD1Q9UHV2 236 aa16.38■□□□□ 0.21
VARS-223ENST00000474643 MAFFQ9ULX9 164 aa16.38■□□□□ 0.21
VARS-223ENST00000474643 A0A0B4J269 797 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 PIGRP01833 764 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 MYL4P12829 197 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 CEBPBP17676 345 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 LRPAP1P30533 357 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 ALDH1A3P47895 512 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 ACOT2P49753 483 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 GUCY2FP51841 1108 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 UBXN2BQ14CS0 331 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 ZC2HC1CQ53FD0 456 aaPredicted RBP16.37■□□□□ 0.21
VARS-223ENST00000474643 ZBTB41Q5SVQ8 909 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 OVOS1Q6IE37 1185 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 JADE1Q6IE81 842 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 PHLDB3Q6NSJ2 640 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 STXBP4Q6ZWJ1 553 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 FRMD5Q7Z6J6 570 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 METTL23Q86XA0 190 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 SYCP3Q8IZU3 236 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 PGLYRP2Q96PD5 576 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 RPP25Q9BUL9 199 aaKnown RBP16.37■□□□□ 0.21
VARS-223ENST00000474643 TRIM9Q9C026 710 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 HAPLN2Q9GZV7 340 aa16.37■□□□□ 0.21
VARS-223ENST00000474643 AGO2Q9UKV8 859 aaKnown RBP16.37■□□□□ 0.21
VARS-223ENST00000474643 USP34Q70CQ2 3546 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 DOCK8Q8NF50 2099 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 A0A1W2PQ27 194 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 A0A1W2PQ64 194 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 A0A1W2PQD8 194 aa16.36■□□□□ 0.21
VARS-223ENST00000474643 OR6C75A6NL08 312 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms