RNA–Protein interactions for RNA: ENST00000474627.7

ATPAF2-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF2, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-206ENST00000474627 HLA-CQ95604 372 aa21.1■□□□□ 0.97
ATPAF2-206ENST00000474627 DDX27Q96GQ7 796 aaKnown RBP21.1■□□□□ 0.97
ATPAF2-206ENST00000474627 KCTD10Q9H3F6 313 aa21.1■□□□□ 0.97
ATPAF2-206ENST00000474627 TRAF3IP3Q9Y228 551 aa21.1■□□□□ 0.97
ATPAF2-206ENST00000474627 ATG2AQ2TAZ0 1938 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 TRIP11Q15643 1979 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 PODXLO00592 558 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 CLIC2O15247 247 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 EXTL3O43909 919 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 GYPCP04921 128 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 PRKCSHP14314 528 aaPredicted RBP21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 MTIF2P46199 727 aaKnown RBP21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 POU5F1Q01860 360 aaKnown RBP21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 ZBTB6Q15916 424 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 MAN2A1Q16706 1144 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 RNF168Q8IYW5 571 aaPredicted RBP21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 GPD1LQ8N335 351 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 TMEM130Q8N3G9 435 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 ERGIC2Q96RQ1 377 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 HERC2P3Q9BVR0 1158 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 ASB7Q9H672 318 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 HSPBP1Q9NZL4 362 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 UBQLN1Q9UMX0 589 aaKnown RBP21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 CITO14578 2027 aa21.09■□□□□ 0.97
ATPAF2-206ENST00000474627 REV3LO60673 3130 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 PDXKO00764 312 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 C2CD2LO14523 706 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 KIAA0391O15091 583 aaKnown RBP21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 NCK2O43639 380 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 NFICP08651 508 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 RPL9P32969 192 aaKnown RBP21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 SNRPFP62306 86 aaKnown RBP21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 FIGNQ5HY92 759 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 FKBP15Q5T1M5 1219 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 KIAA1841Q6NSI8 718 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 NYAP1Q6ZVC0 841 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 CREBRFQ8IUR6 639 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 C3orf58Q8NDZ4 430 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 B3GALT6Q96L58 329 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 TSPAN18Q96SJ8 248 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 MRPL17Q9NRX2 175 aaKnown RBP21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 CLDND1Q9NY35 253 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 RBAKQ9NYW8 714 aaPredicted RBP21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 THEGQ9P2T0 379 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 COG5Q9UP83 839 aa21.08■□□□□ 0.97
ATPAF2-206ENST00000474627 PRUNE2Q8WUY3 3088 aa21.08■□□□□ 0.96
ATPAF2-206ENST00000474627 SF3B1O75533 1304 aaKnown RBP eCLIP21.08■□□□□ 0.961e-7■■■■■ 172.3
ATPAF2-206ENST00000474627 TMEM189-UBE2V1I3L0A0 370 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 LINC01565O15544 149 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 ZSCAN12O43309 604 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 URODP06132 367 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 GUCY2FP51841 1108 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 ADKP55263 362 aaKnown RBP21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 TMEM132DQ14C87 1099 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 PTPN14Q15678 1187 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 DUSP6Q16828 381 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 MIIPQ5JXC2 388 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 CD300LGQ6UXG3 332 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 PABPC5Q96DU9 382 aaKnown RBP21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 UBE2ZQ9H832 354 aaPredicted RBP21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 IRAK3Q9Y616 596 aa21.07■□□□□ 0.96
ATPAF2-206ENST00000474627 GOLGA6L9A6NEM1 432 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 XPOTO43592 962 aaKnown RBP21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 IL18RAPO95256 599 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 CYP3A5P20815 502 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 CASP14P31944 242 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 GLUD2P49448 558 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 CYP2J2P51589 502 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 WNT7BP56706 349 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 TFF2Q03403 129 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 COL19A1Q14993 1142 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 PTPN21Q16825 1174 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 USP41Q3LFD5 358 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 VWA3BQ502W6 1294 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 FAM171A1Q5VUB5 890 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 BRSK2Q8IWQ3 736 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 EFHBQ8N7U6 833 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 CDCA3Q99618 268 aaPredicted RBP21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 CHST7Q9NS84 486 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 CGNQ9P2M7 1197 aaKnown RBP21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 DERAQ9Y315 318 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 DSG1Q02413 1049 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 ADAM15Q13444 863 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 NFIL3Q16649 462 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 CTC1Q2NKJ3 1217 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 KIAA0319Q5VV43 1072 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 CEP57Q86XR8 500 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 CBWD2Q8IUF1 395 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 RDH13Q8NBN7 331 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 BEST2Q8NFU1 509 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 GOLGA5Q8TBA6 731 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 CAPN11Q9UMQ6 739 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 C2CD2Q9Y426 696 aa21.06■□□□□ 0.96
ATPAF2-206ENST00000474627 ZNF233A6NK53 670 aa21.05■□□□□ 0.96
ATPAF2-206ENST00000474627 I3L4J1 428 aa21.05■□□□□ 0.96
ATPAF2-206ENST00000474627 CALUO43852 315 aaPredicted RBP21.05■□□□□ 0.96
ATPAF2-206ENST00000474627 LILRB3O75022 631 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms