RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 FAM212AQ96EL1 285 aa20.16■□□□□ 0.82
COL7A1-209ENST00000474432 CRISPLD1Q9H336 500 aa20.16■□□□□ 0.82
COL7A1-209ENST00000474432 MFSD1Q9H3U5 465 aa20.16■□□□□ 0.82
COL7A1-209ENST00000474432 CYP4F11Q9HBI6 524 aa20.16■□□□□ 0.82
COL7A1-209ENST00000474432 OLFML3Q9NRN5 406 aa20.16■□□□□ 0.82
COL7A1-209ENST00000474432 FAM86C1Q9NVL1 165 aa20.16■□□□□ 0.82
COL7A1-209ENST00000474432 TBC1D7Q9P0N9 293 aa20.16■□□□□ 0.82
COL7A1-209ENST00000474432 AFF4Q9UHB7 1163 aaKnown RBP20.16■□□□□ 0.82
COL7A1-209ENST00000474432 FBXL21Q9UKT6 434 aa20.16■□□□□ 0.82
COL7A1-209ENST00000474432 AGO2Q9UKV8 859 aaKnown RBP20.16■□□□□ 0.82
COL7A1-209ENST00000474432 H0Y858 1186 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 PRRG1O14668 218 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 OR4Q2P0C623 313 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 GAP43P17677 238 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 TXLNAP40222 546 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 CCR2P41597 374 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 STAT6P42226 847 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 GPC5P78333 572 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 YWHAHQ04917 246 aaPredicted RBP20.15■□□□□ 0.82
COL7A1-209ENST00000474432 ADCY1Q08828 1119 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 E2F4Q16254 413 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 SLFN12LQ6IEE8 588 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 ASB7Q9H672 318 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 MRPL44Q9H9J2 332 aaKnown RBP20.15■□□□□ 0.82
COL7A1-209ENST00000474432 CEP72Q9P209 647 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 CA14Q9ULX7 337 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 DERAQ9Y315 318 aa20.15■□□□□ 0.82
COL7A1-209ENST00000474432 XPOTO43592 962 aaKnown RBP20.14■□□□□ 0.81
COL7A1-209ENST00000474432 MOSPD3O75425 235 aa20.14■□□□□ 0.81
COL7A1-209ENST00000474432 CEBPBP17676 345 aa20.14■□□□□ 0.81
COL7A1-209ENST00000474432 PTPN2P17706 415 aa20.14■□□□□ 0.81
COL7A1-209ENST00000474432 TYMPP19971 482 aa20.14■□□□□ 0.81
COL7A1-209ENST00000474432 ELF1P32519 619 aa20.14■□□□□ 0.81
COL7A1-209ENST00000474432 POU5F1Q01860 360 aaKnown RBP20.14■□□□□ 0.81
COL7A1-209ENST00000474432 TMEM132DQ14C87 1099 aa20.14■□□□□ 0.81
COL7A1-209ENST00000474432 L1TD1Q5T7N2 865 aaKnown RBP20.14■□□□□ 0.81
COL7A1-209ENST00000474432 EFCAB13Q8IY85 973 aa20.14■□□□□ 0.81
COL7A1-209ENST00000474432 PDILTQ8N807 584 aa20.14■□□□□ 0.81
COL7A1-209ENST00000474432 TCEAL4Q96EI5 215 aa20.14■□□□□ 0.81
COL7A1-209ENST00000474432 MAFFQ9ULX9 164 aa20.14■□□□□ 0.81
COL7A1-209ENST00000474432 MRPS23Q9Y3D9 190 aaKnown RBP20.14■□□□□ 0.81
COL7A1-209ENST00000474432 SPTLC2O15270 562 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 PPP6R2O75170 966 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 LRG1P02750 347 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 STK38Q15208 465 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 DSTYKQ6XUX3 929 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 HS6ST3Q8IZP7 471 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 MCRS1Q96EZ8 462 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 BORCS6Q96GS4 357 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 SENP8Q96LD8 212 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 TMEM209Q96SK2 561 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 CORO1BQ9BR76 489 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 PLA2G2FQ9BZM2 168 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 C2CD2Q9Y426 696 aa20.13■□□□□ 0.81
COL7A1-209ENST00000474432 IDEP14735 1019 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 CPB1P15086 417 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 EPHA5P54756 1037 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 SCARA3Q6AZY7 606 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 SHC4Q6S5L8 630 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 MTSS1LQ765P7 747 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 GLIS3Q8NEA6 775 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 POMGNT1Q8WZA1 660 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 ACCSQ96QU6 501 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 KXD1Q9BQD3 176 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 RTP3Q9BQQ7 232 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 LRRC3Q9BY71 257 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 TBC1D17Q9HA65 648 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 PANK4Q9NVE7 773 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 KBTBD4Q9NVX7 518 aa20.12■□□□□ 0.81
COL7A1-209ENST00000474432 ZFHX2Q9C0A1 2572 aaPredicted RBP20.11■□□□□ 0.81
COL7A1-209ENST00000474432 OR6C75A6NL08 312 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 GCNT3O95395 438 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 YEATS4O95619 227 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 CYP11A1P05108 521 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 FCARP24071 287 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 TWF1Q12792 350 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 GPR17Q13304 367 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 PKP1Q13835 747 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 POSTNQ15063 836 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 FOXD4L5Q5VV16 416 aaPredicted RBP20.11■□□□□ 0.81
COL7A1-209ENST00000474432 OVOS1Q6IE37 1185 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 CCDC105Q8IYK2 499 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 OR10T2Q8NGX3 314 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 FOXD4L4Q8WXT5 416 aaPredicted RBP20.11■□□□□ 0.81
COL7A1-209ENST00000474432 PGLYRP2Q96PD5 576 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 OXCT2Q9BYC2 517 aaPredicted RBP20.11■□□□□ 0.81
COL7A1-209ENST00000474432 DNAJC25Q9H1X3 360 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 ARHGEF3Q9NR81 526 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 DPP3Q9NY33 737 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 GDE1Q9NZC3 331 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 DLGAP2Q9P1A6 1054 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 YIPF1Q9Y548 306 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 TCHHQ07283 1943 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 USP34Q70CQ2 3546 aa20.11■□□□□ 0.81
COL7A1-209ENST00000474432 MICAL2O94851 1124 aa20.1■□□□□ 0.81
COL7A1-209ENST00000474432 HOXD13P35453 343 aa20.1■□□□□ 0.81
COL7A1-209ENST00000474432 DUSP4Q13115 394 aa20.1■□□□□ 0.81
COL7A1-209ENST00000474432 MYBPC2Q14324 1141 aa20.1■□□□□ 0.81
COL7A1-209ENST00000474432 TANGO2Q6ICL3 276 aa20.1■□□□□ 0.81
COL7A1-209ENST00000474432 CENPPQ6IPU0 288 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms