RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 KIAA0391O15091 583 aaKnown RBP12.11□□□□□ -0.47
CKS1B-206ENST00000474215 SPTLC1O15269 473 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 EXTL3O43909 919 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 SLFN14P0C7P3 912 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 LAMP2P13473 410 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 CMA1P23946 247 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 KRT85P78386 507 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 NTHL1P78549 312 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 YWHAHQ04917 246 aaPredicted RBP12.11□□□□□ -0.47
CKS1B-206ENST00000474215 TDGQ13569 410 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 EPM2AIP1Q7L775 607 aaPredicted RBP12.11□□□□□ -0.47
CKS1B-206ENST00000474215 USP37Q86T82 979 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 NT5DC4Q86YG4 428 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 TCEAL8Q8IYN2 117 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 CEP57L1Q8IYX8 460 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 ZSWIM2Q8NEG5 633 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 ZNF507Q8TCN5 953 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 CBWD1Q9BRT8 395 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 PCIF1Q9H4Z3 704 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 MAFFQ9ULX9 164 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 ATP6V1DQ9Y5K8 247 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 ZFP37Q9Y6Q3 630 aaPredicted RBP12.11□□□□□ -0.47
CKS1B-206ENST00000474215 VWA8A3KMH1 1905 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 MTCL1Q9Y4B5 1905 aaKnown RBP12.1□□□□□ -0.47
CKS1B-206ENST00000474215 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.1□□□□□ -0.47
CKS1B-206ENST00000474215 GOLGA8IPA6NC78 632 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 OR6C75A6NL08 312 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 GOLGA8JA6NMD2 632 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
CKS1B-206ENST00000474215 EIF3DO15371 548 aaKnown RBP eCLIP12.1□□□□□ -0.47
CKS1B-206ENST00000474215 SEC24AO95486 1093 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 ODC1P11926 461 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 CPB1P15086 417 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 TYMPP19971 482 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 CASP1P29466 404 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 HOXD13P35453 343 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 AFMP43652 599 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 EHHADHQ08426 723 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 BECN1Q14457 450 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 FAM26FQ5R3K3 315 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 OVOS1Q6IE37 1185 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 ARMCX5Q6P1M9 558 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 RNF19BQ6ZMZ0 732 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 GET4Q7L5D6 327 aaPredicted RBP12.1□□□□□ -0.47
CKS1B-206ENST00000474215 BRSK2Q8IWQ3 736 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 EFCAB13Q8IY85 973 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 FBXL6Q8N531 539 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 CACTINQ8WUQ7 758 aaKnown RBP12.1□□□□□ -0.47
CKS1B-206ENST00000474215 NXPE3Q969Y0 559 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 CHAMP1Q96JM3 812 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 SENP8Q96LD8 212 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 BLZF1Q9H2G9 400 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 SMOC2Q9H3U7 446 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 CYP4F11Q9HBI6 524 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 RBAKQ9NYW8 714 aaPredicted RBP12.1□□□□□ -0.47
CKS1B-206ENST00000474215 DNMT3BQ9UBC3 853 aaKnown RBP12.1□□□□□ -0.47
CKS1B-206ENST00000474215 AFF4Q9UHB7 1163 aaKnown RBP12.1□□□□□ -0.47
CKS1B-206ENST00000474215 SERTAD1Q9UHV2 236 aa12.1□□□□□ -0.47
CKS1B-206ENST00000474215 DENND4AQ7Z401 1863 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 A0A1B0GVL5 298 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 LRG1P02750 347 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 CYP11A1P05108 521 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 PFKFB1P16118 471 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 PTPN2P17706 415 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 TAF6P49848 677 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 WNT7BP56706 349 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 TFAMQ00059 246 aaKnown RBP12.09□□□□□ -0.47
CKS1B-206ENST00000474215 ADCY1Q08828 1119 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 GPR17Q13304 367 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 CUL4BQ13620 913 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 PABPC1LQ4VXU2 614 aaKnown RBP12.09□□□□□ -0.47
CKS1B-206ENST00000474215 GRAMD1CQ8IYS0 662 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 GPD1LQ8N335 351 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 SLC44A3Q8N4M1 653 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 NOC3LQ8WTT2 800 aaKnown RBP12.09□□□□□ -0.47
CKS1B-206ENST00000474215 RSAD2Q8WXG1 361 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 PAGE5Q96GU1 130 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 SCAND2PQ9GZW5 306 aaPredicted RBP12.09□□□□□ -0.47
CKS1B-206ENST00000474215 KIAA1586Q9HCI6 787 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 PDE11AQ9HCR9 933 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 HCFC1R1Q9NWW0 138 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 USP25Q9UHP3 1055 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 DSEQ9UL01 958 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 CDH7Q9ULB5 785 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 HPSEQ9Y251 543 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 INSL5Q9Y5Q6 135 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
CKS1B-206ENST00000474215 PDCD11Q14690 1871 aaKnown RBP12.08□□□□□ -0.48
CKS1B-206ENST00000474215 ZNF233A6NK53 670 aa12.08□□□□□ -0.48
CKS1B-206ENST00000474215 KPNA7A9QM74 516 aa12.08□□□□□ -0.48
CKS1B-206ENST00000474215 ANHXE9PGG2 379 aa12.08□□□□□ -0.48
CKS1B-206ENST00000474215 CYB561D2O14569 222 aa12.08□□□□□ -0.48
CKS1B-206ENST00000474215 TGFB1I1O43294 461 aa12.08□□□□□ -0.48
CKS1B-206ENST00000474215 ACTN4O43707 911 aaKnown RBP12.08□□□□□ -0.48
CKS1B-206ENST00000474215 OR4Q2P0C623 313 aa12.08□□□□□ -0.48
CKS1B-206ENST00000474215 PNPLA4P41247 253 aa12.08□□□□□ -0.48
CKS1B-206ENST00000474215 SNRPFP62306 86 aaKnown RBP12.08□□□□□ -0.48
CKS1B-206ENST00000474215 MYBPC2Q14324 1141 aa12.08□□□□□ -0.48
CKS1B-206ENST00000474215 METTL23Q86XA0 190 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms