RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DSEQ9UL01 958 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 BACE2Q9Y5Z0 518 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 M0QZQ0 153 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 BIN1O00499 593 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 CYB561D2O14569 222 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 CETN3O15182 167 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 EPCAMP16422 314 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 OR1D2P34982 312 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 PSMC2P35998 433 aaKnown RBP14.83□□□□□ -0.04
USF1-205ENST00000473969 KCNQ1P51787 676 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 ARPP19P56211 112 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 RBM10P98175 930 aaKnown RBP14.83□□□□□ -0.04
USF1-205ENST00000473969 BFSP1Q12934 665 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 SMAD4Q13485 552 aaKnown RBP14.83□□□□□ -0.04
USF1-205ENST00000473969 TRPC3Q13507 836 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 KCNC3Q14003 757 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 EDRF1Q3B7T1 1238 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 ADSSL1Q8N142 457 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 LRRC52Q8N7C0 313 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 C1orf127Q8N9H9 656 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 TRIML1Q8N9V2 468 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 VN1R2Q8NFZ6 395 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.83□□□□□ -0.04
USF1-205ENST00000473969 HDAC7Q8WUI4 952 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 DHTKD1Q96HY7 919 aaPredicted RBP14.83□□□□□ -0.04
USF1-205ENST00000473969 SENP8Q96LD8 212 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 CLSTN3Q9BQT9 956 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 OXCT2Q9BYC2 517 aaPredicted RBP14.83□□□□□ -0.04
USF1-205ENST00000473969 PLEKHA4Q9H4M7 779 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 MAN1C1Q9NR34 630 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 LMBRD1Q9NUN5 540 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 KIAA1468Q9P260 1216 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 CDY1Q9Y6F8 540 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 TRIP11Q15643 1979 aa14.83□□□□□ -0.04
USF1-205ENST00000473969 KPNA7A9QM74 516 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 PPEF2O14830 753 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 MAPK13O15264 365 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 TGM5O43548 720 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 TYMPP19971 482 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 ELF1P32519 619 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 AARSP49588 968 aaKnown RBP eCLIP14.82□□□□□ -0.04
USF1-205ENST00000473969 WNT7BP56706 349 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 LRRC63Q05C16 580 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 ITIH3Q06033 890 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 BIRC3Q13489 604 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 RARS2Q5T160 578 aaKnown RBP14.82□□□□□ -0.04
USF1-205ENST00000473969 LIN9Q5TKA1 542 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 CENPPQ6IPU0 288 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 KLHL10Q6JEL2 608 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 INTS8Q75QN2 995 aaKnown RBP14.82□□□□□ -0.04
USF1-205ENST00000473969 TRAPPC11Q7Z392 1133 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 FAM186BQ8IYM0 893 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 THEM5Q8N1Q8 247 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 TMEM130Q8N3G9 435 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 OR5B17Q8NGF7 314 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 MSLNLQ96KJ4 702 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 POP1Q99575 1024 aaKnown RBP14.82□□□□□ -0.04
USF1-205ENST00000473969 APOL5Q9BWW9 433 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 NUP62CLQ9H1M0 184 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 CLSTN2Q9H4D0 955 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 SFXN1Q9H9B4 322 aa14.82□□□□□ -0.04
USF1-205ENST00000473969 TIMM13Q9Y5L4 95 aaPredicted RBP14.82□□□□□ -0.04
USF1-205ENST00000473969 BICDL2A1A5D9 508 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 GRXCR2A6NFK2 248 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 MBTPS2O43462 519 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 HUS1O60921 280 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 SPATA31D3P0C874 917 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 EPB41P11171 864 aaKnown RBP14.81□□□□□ -0.04
USF1-205ENST00000473969 CCNE1P24864 410 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 CASP4P49662 377 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 FKBP3Q00688 224 aaKnown RBP14.81□□□□□ -0.04
USF1-205ENST00000473969 RAB33AQ14088 237 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 MORC3Q14149 939 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 OVOS1Q6IE37 1185 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 SPATA31D4Q6ZUB0 917 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 SMRP1Q8NCR6 262 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 KREMEN2Q8NCW0 462 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 TMC2Q8TDI7 906 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 PARD3BQ8TEW8 1205 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 HPDLQ96IR7 371 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 RIPOR3Q96MK2 946 aa14.81□□□□□ -0.04
USF1-205ENST00000473969 OR6C75A6NL08 312 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 LRRIQ3A6PVS8 624 aaPredicted RBP14.8□□□□□ -0.04
USF1-205ENST00000473969 SPTLC1O15269 473 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 OAZ2O95190 189 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 BMP1P13497 986 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 CPB1P15086 417 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 VAMP7P51809 220 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 MRPL58Q14197 206 aaKnown RBP14.8□□□□□ -0.04
USF1-205ENST00000473969 ZCWPW2Q504Y3 356 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 ATAT1Q5SQI0 421 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 ANKRD40Q6AI12 368 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 SLC8B1Q6J4K2 584 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 SYCE2Q6PIF2 218 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 CCDC149Q6ZUS6 474 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 MKNK1Q9BUB5 465 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 ADAM7Q9H2U9 754 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 PIDD1Q9HB75 910 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 FBXL5Q9UKA1 691 aa14.8□□□□□ -0.04
USF1-205ENST00000473969 USP15Q9Y4E8 981 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms