RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 FOXR2Q6PJQ5 311 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 RBM43Q6ZSC3 357 aaKnown RBP13.38□□□□□ -0.27
DDX56-209ENST00000473924 ANKS3Q6ZW76 656 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 GLYCTKQ8IVS8 523 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 GPR65Q8IYL9 337 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 LRRC52Q8N7C0 313 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 LNX1Q8TBB1 728 aaPredicted RBP13.38□□□□□ -0.27
DDX56-209ENST00000473924 PIK3R5Q8WYR1 880 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 ZNF516Q92618 1163 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 SENP8Q96LD8 212 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 CEP63Q96MT8 703 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 KLHL5Q96PQ7 755 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 DUSP9Q99956 384 aaKnown RBP13.38□□□□□ -0.27
DDX56-209ENST00000473924 GZF1Q9H116 711 aaPredicted RBP13.38□□□□□ -0.27
DDX56-209ENST00000473924 TMEM63CQ9P1W3 806 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 RWDD2AQ9UIY3 292 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 PCDHB8Q9UN66 801 aa13.38□□□□□ -0.27
DDX56-209ENST00000473924 MYO7AQ13402 2215 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 H7C4K7 107 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 M0QZQ0 153 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 IKBKBO14920 756 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 SPTLC1O15269 473 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 TEX28O15482 410 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 STX10O60499 249 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 LILRB3O75022 631 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
DDX56-209ENST00000473924 TRIM49P0CI25 452 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 TRIM49CP0CI26 452 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 SRGAP2BP0DMP2 458 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 RPL17P18621 184 aaKnown RBP13.37□□□□□ -0.27
DDX56-209ENST00000473924 AARSP49588 968 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDX56-209ENST00000473924 NDUFV1P49821 464 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 CLDN10P78369 228 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 KLHL40Q2TBA0 621 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 DCAF17Q5H9S7 520 aaPredicted RBP13.37□□□□□ -0.27
DDX56-209ENST00000473924 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
DDX56-209ENST00000473924 TCERG1LQ5VWI1 586 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 FILIP1Q7Z7B0 1213 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 PPFIBP1Q86W92 1011 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 METTL23Q86XA0 190 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 ZC3H3Q8IXZ2 948 aaKnown RBP13.37□□□□□ -0.27
DDX56-209ENST00000473924 EFHBQ8N7U6 833 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 HLA-CQ95604 372 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 PABPC5Q96DU9 382 aaKnown RBP13.37□□□□□ -0.27
DDX56-209ENST00000473924 HPDLQ96IR7 371 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 SRRTQ9BXP5 876 aaKnown RBP13.37□□□□□ -0.27
DDX56-209ENST00000473924 MMRN2Q9H8L6 949 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 RXFP1Q9HBX9 757 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 METTL14Q9HCE5 456 aaKnown RBP13.37□□□□□ -0.27
DDX56-209ENST00000473924 FNIP2Q9P278 1114 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 ARMCX3Q9UH62 379 aaPredicted RBP13.37□□□□□ -0.27
DDX56-209ENST00000473924 SIX4Q9UIU6 781 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 DSEQ9UL01 958 aa13.37□□□□□ -0.27
DDX56-209ENST00000473924 TIMM13Q9Y5L4 95 aaPredicted RBP13.37□□□□□ -0.27
DDX56-209ENST00000473924 SPDYE4A6NLX3 237 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 CYB561D2O14569 222 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 LINC01565O15544 149 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 HUS1O60921 280 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 CST3P01034 146 aaPredicted RBP13.36□□□□□ -0.27
DDX56-209ENST00000473924 C4BPAP04003 597 aaKnown RBP13.36□□□□□ -0.27
DDX56-209ENST00000473924 YWHAHQ04917 246 aaPredicted RBP13.36□□□□□ -0.27
DDX56-209ENST00000473924 ENPEPQ07075 957 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 ADAM15Q13444 863 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 SKOR2Q2VWA4 1001 aaPredicted RBP13.36□□□□□ -0.27
DDX56-209ENST00000473924 CTXN3Q4LDR2 81 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 TDRD10Q5VZ19 366 aaKnown RBP13.36□□□□□ -0.27
DDX56-209ENST00000473924 ZNF280DQ6N043 979 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 PALB2Q86YC2 1186 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 UBE2ZQ9H832 354 aaPredicted RBP13.36□□□□□ -0.27
DDX56-209ENST00000473924 MTRRQ9UBK8 725 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 COG5Q9UP83 839 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 SNX9Q9Y5X1 595 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 HCFC2Q9Y5Z7 792 aa13.36□□□□□ -0.27
DDX56-209ENST00000473924 SCN1AP35498 2009 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 VWA8A3KMH1 1905 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 GNA14O95837 355 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 TYMPP19971 482 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 KCNA5P22460 613 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 ERCC5P28715 1186 aaPredicted RBP13.35□□□□□ -0.27
DDX56-209ENST00000473924 OR1D2P34982 312 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 PIK3CAP42336 1068 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 GCLMP48507 274 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 CLCN4P51793 760 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 ARPP19P56211 112 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 MYL6P60660 151 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 NCOA4Q13772 614 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 STX1AQ16623 288 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 CT47A1Q5JQC4 288 aaPredicted RBP13.35□□□□□ -0.27
DDX56-209ENST00000473924 SCARA3Q6AZY7 606 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 OVOS1Q6IE37 1185 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 ELMSAN1Q6PJG2 1045 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 SV2AQ7L0J3 742 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 FRMD5Q7Z6J6 570 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 CREBRFQ8IUR6 639 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 CXorf38Q8TB03 319 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 CASP10Q92851 521 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 BORCS6Q96GS4 357 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 CLSTN3Q9BQT9 956 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 PRDM6Q9NQX0 595 aa13.35□□□□□ -0.27
DDX56-209ENST00000473924 ANO10Q9NW15 660 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms