RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 CXorf38Q8TB03 319 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 SHC3Q92529 594 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 TAF4BQ92750 862 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 HPDLQ96IR7 371 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 FAM81BQ96LP2 452 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 TOX2Q96NM4 488 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 GAD1Q99259 594 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 EIF3CQ99613 913 aaKnown RBP11.53□□□□□ -0.56
SP140-208ENST00000473711 ARID3AQ99856 593 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 IFIH1Q9BYX4 1025 aaKnown RBP11.53□□□□□ -0.56
SP140-208ENST00000473711 PPP1R12CQ9BZL4 782 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 XYLT2Q9H1B5 865 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 RRAGDQ9NQL2 400 aaPredicted RBP11.53□□□□□ -0.56
SP140-208ENST00000473711 RGS18Q9NS28 235 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 KCND1Q9NSA2 647 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 MIOSQ9NXC5 875 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 NXF1Q9UBU9 619 aaKnown RBP11.53□□□□□ -0.56
SP140-208ENST00000473711 TUBGCP4Q9UGJ1 667 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 ITGA11Q9UKX5 1188 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 UBQLN1Q9UMX0 589 aaKnown RBP11.53□□□□□ -0.56
SP140-208ENST00000473711 POLIQ9UNA4 740 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 PCDHB4Q9Y5E5 795 aa11.53□□□□□ -0.56
SP140-208ENST00000473711 BZW2Q9Y6E2 419 aaKnown RBP11.53□□□□□ -0.56
SP140-208ENST00000473711 A0A0U1RQF3 1178 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 A0A0U1RQJ8 604 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 CCP110O43303 1012 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 ZNF623O75123 536 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 OFD1O75665 1012 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 SKIP12755 728 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 TBXAS1P24557 533 aaPredicted RBP11.52□□□□□ -0.57
SP140-208ENST00000473711 ATICP31939 592 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 CLCN1P35523 988 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 RAB27AP51159 221 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 CCL23P55773 120 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 CYP27A1Q02318 531 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 GFPT1Q06210 699 aaPredicted RBP11.52□□□□□ -0.57
SP140-208ENST00000473711 SPA17Q15506 151 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 ZNF667Q5HYK9 610 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 AGMOQ6ZNB7 445 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 ECHDC2Q86YB7 292 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 FMNL3Q8IVF7 1028 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 ATRIPQ8WXE1 791 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 PGBD4Q96DM1 585 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 SCLYQ96I15 445 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 PPP1R13BQ96KQ4 1090 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 ZFP42Q96MM3 310 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 TSPAN18Q96SJ8 248 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 TRAIPQ9BWF2 469 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 NIF3L1Q9GZT8 377 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 MCOLN1Q9GZU1 580 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 HIPK3Q9H422 1215 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 GIT1Q9Y2X7 761 aa11.52□□□□□ -0.57
SP140-208ENST00000473711 REXO2Q9Y3B8 237 aaKnown RBP11.52□□□□□ -0.57
SP140-208ENST00000473711 ANK1P16157 1881 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 CCDC85CA6NKD9 419 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 PTGESO14684 152 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 PPEF2O14830 753 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 ZNF263O14978 683 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 XPOTO43592 962 aaKnown RBP11.51□□□□□ -0.57
SP140-208ENST00000473711 IPO7O95373 1038 aaKnown RBP11.51□□□□□ -0.57
SP140-208ENST00000473711 CALCAP01258 141 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 WEE2P0C1S8 567 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 ACO1P21399 889 aaKnown RBP11.51□□□□□ -0.57
SP140-208ENST00000473711 TNFAIP3P21580 790 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 CYP2C18P33260 490 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 MLH1P40692 756 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 AFF1P51825 1210 aaKnown RBP11.51□□□□□ -0.57
SP140-208ENST00000473711 KRT83P78385 493 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 LRRC26Q2I0M4 334 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 WDR72Q3MJ13 1102 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 PLEKHG4Q58EX7 1191 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 C1orf53Q5VUE5 145 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 C9orf57Q5W0N0 161 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 SCARA5Q6ZMJ2 495 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 DBF4BQ8NFT6 615 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 SLC20A1Q8WUM9 679 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 LINC01599Q8WXQ3 324 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 JAKMIP2Q96AA8 810 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 RPS6KC1Q96S38 1066 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 AGPAT1Q99943 283 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 ACP6Q9NPH0 428 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 TMEM39AQ9NV64 488 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 ADAMTS1Q9UHI8 967 aa11.51□□□□□ -0.57
SP140-208ENST00000473711 A0A087X0T9 212 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 ARL5CA6NH57 179 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 C9IYK1 514 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 DDX3XO00571 662 aaKnown RBP eCLIP11.5□□□□□ -0.57
SP140-208ENST00000473711 ENPP3O14638 875 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 LCA5LO95447 670 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 FAM228BP0C875 321 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 ATF7P17544 494 aaPredicted RBP11.5□□□□□ -0.57
SP140-208ENST00000473711 CD58P19256 250 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 CYP3A5P20815 502 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 MAGEA1P43355 309 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 ASPAP45381 313 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 RAP1GAPP47736 663 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 SCNN1GP51170 649 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 CDH8P55286 799 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 FAM189BP81408 668 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms