RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 DMGDHQ9UI17 866 aaKnown RBP6.66□□□□□ -1.34
CLK1-210ENST00000473565 AGAP1Q9UPQ3 857 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 ALG6Q9Y672 507 aa6.66□□□□□ -1.34
CLK1-210ENST00000473565 SMIM35A0A1B0GVV1 85 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 ZSCAN5CA6NGD5 496 aaPredicted RBP6.65□□□□□ -1.34
CLK1-210ENST00000473565 DUSP11O75319 330 aaKnown RBP6.65□□□□□ -1.34
CLK1-210ENST00000473565 GZMAP12544 262 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 PRKAR2AP13861 404 aaKnown RBP6.65□□□□□ -1.34
CLK1-210ENST00000473565 PRLRP16471 622 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 EIF4BP23588 611 aaKnown RBP6.65□□□□□ -1.34
CLK1-210ENST00000473565 TMEM132DQ14C87 1099 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 SNX17Q15036 470 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 IFI16Q16666 785 aaKnown RBP6.65□□□□□ -1.34
CLK1-210ENST00000473565 NBPF20Q3BBV1 942 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 MROH7Q68CQ1 1323 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 MMS22LQ6ZRQ5 1243 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 KLHL7Q8IXQ5 586 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 CXorf38Q8TB03 319 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 ZNF564Q8TBZ8 553 aaPredicted RBP6.65□□□□□ -1.34
CLK1-210ENST00000473565 CD99L2Q8TCZ2 262 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 KIF12Q96FN5 646 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 ACAP3Q96P50 834 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 ADPGKQ9BRR6 497 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 AMFRQ9UKV5 643 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 IL18RAPO95256 599 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 MYBL2P10244 700 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 ITGA4P13612 1032 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 CD19P15391 556 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 COMTP21964 271 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 TBXAS1P24557 533 aaPredicted RBP6.65□□□□□ -1.34
CLK1-210ENST00000473565 PAFAH1B1P43034 410 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 SURF1Q15526 300 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 MFSD14CQ5VZR4 134 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 GDF6Q6KF10 455 aaPredicted RBP6.65□□□□□ -1.34
CLK1-210ENST00000473565 CC2D1AQ6P1N0 951 aaPredicted RBP6.65□□□□□ -1.34
CLK1-210ENST00000473565 SESTD1Q86VW0 696 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 MSANTD4Q8NCY6 345 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 C1orf131Q8NDD1 294 aaKnown RBP6.65□□□□□ -1.34
CLK1-210ENST00000473565 ZNF606Q8WXB4 792 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 ABCB6Q9NP58 842 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 CACNG4Q9UBN1 327 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 TJP2Q9UDY2 1190 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 NR2E1Q9Y466 385 aa6.65□□□□□ -1.34
CLK1-210ENST00000473565 ESYT3A0FGR9 886 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 MEIS3P2A8K0S8 358 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 DDX3YO15523 660 aaKnown RBP6.65□□□□□ -1.35
CLK1-210ENST00000473565 HCRTO43612 131 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 SASH3O75995 380 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 RECQL4O94761 1208 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 NSFP46459 744 aaKnown RBP6.65□□□□□ -1.35
CLK1-210ENST00000473565 ZNF132P52740 706 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 AP3M2P53677 418 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 NOMO3P69849 1222 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 SP3Q02447 781 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 NOGQ13253 232 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 HSP90AA2PQ14568 343 aaPredicted RBP6.65□□□□□ -1.35
CLK1-210ENST00000473565 DEFB115Q30KQ5 88 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 CFAP221Q4G0U5 840 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 ZNF667Q5HYK9 610 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 TMCO3Q6UWJ1 677 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 MCOLN2Q8IZK6 566 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 HES6Q96HZ4 224 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 KRT12Q99456 494 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 TRIM6Q9C030 488 aaPredicted RBP6.65□□□□□ -1.35
CLK1-210ENST00000473565 GOLGA2P5Q9HBQ8 144 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 DPP3Q9NY33 737 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 TSKSQ9UJT2 592 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 ANAPC7Q9UJX3 599 aa6.65□□□□□ -1.35
CLK1-210ENST00000473565 NOC2LQ9Y3T9 749 aaKnown RBP6.65□□□□□ -1.35
CLK1-210ENST00000473565 SCN10AQ9Y5Y9 1956 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 O00370 1275 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 MYCP01106 439 aaPredicted RBP6.64□□□□□ -1.35
CLK1-210ENST00000473565 CYP1A1P04798 512 aaPredicted RBP6.64□□□□□ -1.35
CLK1-210ENST00000473565 CYP1A2P05177 515 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 IGFBP6P24592 240 aaPredicted RBP6.64□□□□□ -1.35
CLK1-210ENST00000473565 GJA9P57773 515 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 TRADDQ15628 312 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 CYP4A22Q5TCH4 519 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 DENND1BQ6P3S1 775 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 SLC27A1Q6PCB7 646 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 RHOT2Q8IXI1 618 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 ARRDC4Q8NCT1 418 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 HPDLQ96IR7 371 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 LPIN3Q9BQK8 851 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 XPNPEP3Q9NQH7 507 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 GTF3C4Q9UKN8 822 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 CNTN6Q9UQ52 1028 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 ATP8B3O60423 1300 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 PIK3R2O00459 728 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 TOMM70O94826 608 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 ASGR1P07306 291 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 RARBP10826 455 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 GRM5P41594 1212 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 CENPCQ03188 943 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 NFX1Q12986 1120 aaKnown RBP6.64□□□□□ -1.35
CLK1-210ENST00000473565 NOTUMQ6P988 496 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 SYCE1Q8N0S2 351 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 USP38Q8NB14 1042 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 WHAMMQ8TF30 809 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 MTG1Q9BT17 334 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms