RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 AOPEPQ8N6M6 819 aa6.28□□□□□ -1.4
CD46-213ENST00000471987 FRMD4BQ9Y2L6 1034 aa6.28□□□□□ -1.4
CD46-213ENST00000471987 IPPQ9Y573 584 aa6.28□□□□□ -1.4
CD46-213ENST00000471987 MRFAP1Q9Y605 127 aa6.28□□□□□ -1.4
CD46-213ENST00000471987 LRRC3CA6NJW4 275 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 HTRA2O43464 458 aaPredicted RBP6.27□□□□□ -1.41
CD46-213ENST00000471987 SLC43A1O75387 559 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 MT-CO1P00395 513 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 RPLP2P05387 115 aaKnown RBP6.27□□□□□ -1.41
CD46-213ENST00000471987 CD1AP06126 327 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 GATA3P23771 443 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 ZNF280AP59817 542 aaPredicted RBP6.27□□□□□ -1.41
CD46-213ENST00000471987 PIGFQ07326 219 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 DYRK1AQ13627 763 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 SYDE2Q5VT97 1194 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 FBXL20Q96IG2 436 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 UROC1Q96N76 676 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 KLHL32Q96NJ5 620 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 CALCOCO1Q9P1Z2 691 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 CTTNBP2NLQ9P2B4 639 aa6.27□□□□□ -1.41
CD46-213ENST00000471987 CCDC195A0A1B0GUA6 201 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 XPOTO43592 962 aaKnown RBP6.26□□□□□ -1.41
CD46-213ENST00000471987 RBMXL2O75526 392 aaKnown RBP6.26□□□□□ -1.41
CD46-213ENST00000471987 ANXA11P50995 505 aaKnown RBP6.26□□□□□ -1.41
CD46-213ENST00000471987 HNRNPA0Q13151 305 aaKnown RBP6.26□□□□□ -1.41
CD46-213ENST00000471987 CD300EQ496F6 205 aaPredicted RBP6.26□□□□□ -1.41
CD46-213ENST00000471987 PREPLQ4J6C6 727 aaPredicted RBP6.26□□□□□ -1.41
CD46-213ENST00000471987 LRCH2Q5VUJ6 765 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 SLC30A5Q8TAD4 765 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 SNX19Q92543 992 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 PGBD1Q96JS3 809 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 CLPTM1LQ96KA5 538 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 MRGPRX4Q96LA9 322 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 TIMP4Q99727 224 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 IL17RBQ9NRM6 502 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 ASB6Q9NWX5 421 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 ARPP21Q9UBL0 812 aaPredicted RBP6.26□□□□□ -1.41
CD46-213ENST00000471987 LIMCH1Q9UPQ0 1083 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 ENTPD2Q9Y5L3 495 aa6.26□□□□□ -1.41
CD46-213ENST00000471987 CCDC154A6NI56 674 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 TOR1BO14657 336 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 SUN1O94901 812 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 ANXA1P04083 346 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 MYBL2P10244 700 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 GRIA3P42263 894 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 MAPK10P53779 464 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 KRT85P78386 507 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 TLE1Q04724 770 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 IL10RAQ13651 578 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 PTPRRQ15256 657 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 C3orf36Q3SXR2 165 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 FLYWCH1Q4VC44 716 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 MICALCLQ6ZW33 695 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 PEG10Q86TG7 708 aaKnown RBP6.25□□□□□ -1.41
CD46-213ENST00000471987 ADGRG5Q8IZF4 528 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 CFAP52Q8N1V2 620 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 TOR1AIP2Q8NFQ8 470 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 LPIN2Q92539 896 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 IMPG2Q9BZV3 1241 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 MAN1C1Q9NR34 630 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 VSX1Q9NZR4 365 aaPredicted RBP6.25□□□□□ -1.41
CD46-213ENST00000471987 TRHDEQ9UKU6 1024 aa6.25□□□□□ -1.41
CD46-213ENST00000471987 E7ENX8 843 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 INO80B-WBP1J3KQ70 363 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 PCDHGA12O60330 932 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 WT1P19544 449 aaPredicted RBP6.24□□□□□ -1.41
CD46-213ENST00000471987 EDNRBP24530 442 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 POU6F2P78424 691 aaPredicted RBP6.24□□□□□ -1.41
CD46-213ENST00000471987 KIF23Q02241 960 aaPredicted RBP6.24□□□□□ -1.41
CD46-213ENST00000471987 TAP2Q03519 686 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 HLXQ14774 488 aaPredicted RBP6.24□□□□□ -1.41
CD46-213ENST00000471987 ABCB5Q2M3G0 1257 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 TMIEQ8NEW7 156 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 TFAP2BQ92481 460 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 COA7Q96BR5 231 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 INO80BQ9C086 356 aaPredicted RBP6.24□□□□□ -1.41
CD46-213ENST00000471987 PCDHGA9Q9Y5G4 932 aaKnown RBP6.24□□□□□ -1.41
CD46-213ENST00000471987 PCDHGA8Q9Y5G5 932 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 PCDHGA7Q9Y5G6 932 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 PCDHGA6Q9Y5G7 932 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 PCDHGA3Q9Y5H0 932 aa6.24□□□□□ -1.41
CD46-213ENST00000471987 SHTN1A0MZ66 631 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 GPD1P21695 349 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 GUCY2FP51841 1108 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 SOX10P56693 466 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 RNF187Q5TA31 235 aaPredicted RBP6.23□□□□□ -1.41
CD46-213ENST00000471987 TSHZ1Q6ZSZ6 1077 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 SRRM1Q8IYB3 904 aaKnown RBP6.23□□□□□ -1.41
CD46-213ENST00000471987 PDPRQ8NCN5 879 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 SLC17A8Q8NDX2 589 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 NSUN7Q8NE18 718 aaKnown RBP6.23□□□□□ -1.41
CD46-213ENST00000471987 MYCBPAPQ8TBZ2 947 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 SARAFQ96BY9 339 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 TEKT5Q96M29 485 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 WDR26Q9H7D7 661 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 CPNE5Q9HCH3 593 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 KMT5AQ9NQR1 393 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 SLC45A2Q9UMX9 530 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 PCDHB1Q9Y5F3 818 aa6.23□□□□□ -1.41
CD46-213ENST00000471987 CFAP20Q9Y6A4 193 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms