RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 A0A0G2JMZ2 1700 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 PTPRJQ12913 1337 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 DNAJC25-GNG10A0A024R161 153 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 A0A087WUV0 522 aaPredicted RBP11.3□□□□□ -0.6
APLF-204ENST00000471727 GMNCA6NCL1 334 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 ASB14A6NK59 587 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 TLR3O15455 904 aaKnown RBP11.3□□□□□ -0.6
APLF-204ENST00000471727 B4GALT4O60513 344 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 CNMDO75829 334 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 TNNC2P02585 160 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 MMP8P22894 467 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 EIF4BP23588 611 aaKnown RBP11.3□□□□□ -0.6
APLF-204ENST00000471727 ATP5DP30049 168 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 CDH5P33151 784 aaPredicted RBP11.3□□□□□ -0.6
APLF-204ENST00000471727 MAGEA9P43362 315 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 GUCY1A3Q02108 690 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 FSTL1Q12841 308 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 SPOPLQ6IQ16 392 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 MPZL3Q6UWV2 235 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 YTHDF3Q7Z739 585 aaKnown RBP11.3□□□□□ -0.6
APLF-204ENST00000471727 NLRP14Q86W24 1093 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 CCDC89Q8N998 374 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 OR5B17Q8NGF7 314 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 ANKRD36BP1Q96IX9 119 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 C11orf70Q9BRQ4 267 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 RASSF4Q9H2L5 321 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 FZD8Q9H461 694 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 FAM124BQ9H5Z6 455 aaPredicted RBP11.3□□□□□ -0.6
APLF-204ENST00000471727 STRIP2Q9ULQ0 834 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 SIP14410 1827 aa11.3□□□□□ -0.6
APLF-204ENST00000471727 MYH9P35579 1960 aaKnown RBP11.3□□□□□ -0.6
APLF-204ENST00000471727 RGS16O15492 202 aaPredicted RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 MED7O43513 233 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 FAM189A1O60320 539 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 TMEM191BP0C7N4 346 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 PROZP22891 400 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 POLR2BP30876 1174 aaKnown RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 HPDP32754 393 aaPredicted RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 PTPN7P35236 360 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 WNT7BP56706 349 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 TNFAIP2Q03169 654 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 KRT17Q04695 432 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 KLF1Q13351 362 aaPredicted RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 PIGHQ14442 188 aaPredicted RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 SLC29A2Q14542 456 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 TTLL4Q14679 1199 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 R3HDM1Q15032 1099 aaKnown RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 PLCB4Q15147 1175 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 LY6KQ17RY6 165 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 ZNF484Q5JVG2 852 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 MFSD5Q6N075 450 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 DRICH1Q6PGQ1 229 aaPredicted RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 TAOK1Q7L7X3 1001 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 RNF149Q8NC42 400 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 ZC3H15Q8WU90 426 aaKnown RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 PPM1EQ8WY54 764 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 RNF25Q96BH1 459 aaPredicted RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 CCT8L2Q96SF2 557 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 MMP19Q99542 508 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 TRAIPQ9BWF2 469 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 OSBPL8Q9BZF1 889 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 EPB41L4BQ9H329 900 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 DDX56Q9NY93 547 aaKnown RBP11.29□□□□□ -0.6
APLF-204ENST00000471727 UMODL1Q5DID0 1318 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 WDR90Q96KV7 1748 aa11.29□□□□□ -0.6
APLF-204ENST00000471727 TCRBV7S2A1N4TA0A589 114 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 TMEM191CA6NGB0 347 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 SOCS7O14512 581 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 RIPK2O43353 540 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 TRAPPC3O43617 180 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 KIAA0754O94854 1291 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 SRGAP2CP0DJJ0 459 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 ATF2P15336 505 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 FAM187BQ17R55 369 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 ZBTB41Q5SVQ8 909 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 CCDC62Q6P9F0 684 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 ZNF365Q70YC5 407 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 RELL1Q8IUW5 271 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 MYCBPAPQ8TBZ2 947 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 ZNF473Q8WTR7 871 aaKnown RBP11.28□□□□□ -0.6
APLF-204ENST00000471727 SPATA33Q96N06 139 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 SCLT1Q96NL6 688 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 FRMD8P1Q9BZ68 369 aaPredicted RBP11.28□□□□□ -0.6
APLF-204ENST00000471727 ELP3Q9H9T3 547 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 PTPRHQ9HD43 1115 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 PRMT7Q9NVM4 692 aaPredicted RBP11.28□□□□□ -0.6
APLF-204ENST00000471727 WDR35Q9P2L0 1181 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 ASIC3Q9UHC3 531 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 TNFSF13BQ9Y275 285 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 PTPN22Q9Y2R2 807 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 FAM169AQ9Y6X4 670 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 LCTP09848 1927 aa11.28□□□□□ -0.6
APLF-204ENST00000471727 UNCXA6NJT0 531 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 E7EVH7 732 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 ABLIM1O14639 778 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 RASGRF2O14827 1237 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 MAGEB2O15479 319 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 CAND2O75155 1236 aa11.27□□□□□ -0.6
APLF-204ENST00000471727 TCEA3O75764 348 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms