RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 MTSS1LQ765P7 747 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 NPAS3Q8IXF0 933 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 TCEAL8Q8IYN2 117 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 HVCN1Q96D96 273 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 RPF1Q9H9Y2 349 aaKnown RBP20.46■□□□□ 0.87
COMMD1-207ENST00000471704 ARHGEF3Q9NR81 526 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 SEL1LQ9UBV2 794 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 NUB1Q9Y5A7 615 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 H7C4K7 107 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 NFICP08651 508 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 GAP43P17677 238 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 CYP3A5P20815 502 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 ABCD1P33897 745 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 MCM4P33991 863 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 JADE1Q6IE81 842 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 POTEHQ6S545 545 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 ASCL5Q7RTU5 278 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 ZSWIM2Q8NEG5 633 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 MRPL44Q9H9J2 332 aaKnown RBP20.45■□□□□ 0.86
COMMD1-207ENST00000471704 OLFML3Q9NRN5 406 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 FBXL5Q9UKA1 691 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 UBQLN1Q9UMX0 589 aaKnown RBP20.45■□□□□ 0.86
COMMD1-207ENST00000471704 SPTBN4Q9H254 2564 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 CACNA1IQ9P0X4 2223 aa20.45■□□□□ 0.86
COMMD1-207ENST00000471704 M0QZQ0 153 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 STK25O00506 426 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 CUTAO60888 179 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 SEC24AO95486 1093 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 HSP90AA1P07900 732 aaKnown RBP20.44■□□□□ 0.86
COMMD1-207ENST00000471704 AARSP49588 968 aaKnown RBP eCLIP20.44■□□□□ 0.86
COMMD1-207ENST00000471704 STARD6P59095 220 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 ANGPT1Q15389 498 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 SLC5A9Q2M3M2 681 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 L1TD1Q5T7N2 865 aaKnown RBP20.44■□□□□ 0.86
COMMD1-207ENST00000471704 SPATA1Q5VX52 437 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 TPGS2Q68CL5 300 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 ADALQ6DHV7 355 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 FRMD5Q7Z6J6 570 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 DLGAP2Q9P1A6 1054 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 AGO2Q9UKV8 859 aaKnown RBP20.44■□□□□ 0.86
COMMD1-207ENST00000471704 PCDHB8Q9UN66 801 aa20.44■□□□□ 0.86
COMMD1-207ENST00000471704 MRPS23Q9Y3D9 190 aaKnown RBP20.44■□□□□ 0.86
COMMD1-207ENST00000471704 GVINP1Q7Z2Y8 2422 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 PRR23AA6NEV1 266 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 RHOP08100 348 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 IDEP14735 1019 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 PTPN2P17706 415 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 WNT7BP56706 349 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 CTXN3Q4LDR2 81 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 GLIS3Q8NEA6 775 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 APPL2Q8NEU8 664 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 HPS3Q969F9 1004 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 FAM212AQ96EL1 285 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 PANK4Q9NVE7 773 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 KBTBD4Q9NVX7 518 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 GDE1Q9NZC3 331 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 MAFFQ9ULX9 164 aa20.43■□□□□ 0.86
COMMD1-207ENST00000471704 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.43■□□□□ 0.86
COMMD1-207ENST00000471704 ZNF292O60281 2723 aa20.42■□□□□ 0.86
COMMD1-207ENST00000471704 PRRG1O14668 218 aa20.42■□□□□ 0.86
COMMD1-207ENST00000471704 GCNT3O95395 438 aa20.42■□□□□ 0.86
COMMD1-207ENST00000471704 ELF1P32519 619 aa20.42■□□□□ 0.86
COMMD1-207ENST00000471704 PRSS36Q5K4E3 855 aa20.42■□□□□ 0.86
COMMD1-207ENST00000471704 DHX58Q96C10 678 aa20.42■□□□□ 0.86
COMMD1-207ENST00000471704 DDX23Q9BUQ8 820 aaKnown RBP20.42■□□□□ 0.86
COMMD1-207ENST00000471704 TNMDQ9H2S6 317 aa20.42■□□□□ 0.86
COMMD1-207ENST00000471704 PCDHA7Q9UN72 937 aa20.42■□□□□ 0.86
COMMD1-207ENST00000471704 SIT1Q9Y3P8 196 aa20.42■□□□□ 0.86
COMMD1-207ENST00000471704 TIMM13Q9Y5L4 95 aaPredicted RBP20.42■□□□□ 0.86
COMMD1-207ENST00000471704 MIA3Q5JRA6 1907 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 SPTLC1O15269 473 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 MICAL2O94851 1124 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 OAZ2O95190 189 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 LRG1P02750 347 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 ARPP19P56211 112 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 DNM1Q05193 864 aaKnown RBP20.41■□□□□ 0.86
COMMD1-207ENST00000471704 SLFN12LQ6IEE8 588 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 ZNF280DQ6N043 979 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 CD302Q8IX05 232 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 EFCAB13Q8IY85 973 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 ING5Q8WYH8 240 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 POMGNT1Q8WZA1 660 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 SHDQ96IW2 340 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 CHAMP1Q96JM3 812 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 ACCSQ96QU6 501 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 TSPAN18Q96SJ8 248 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 KXD1Q9BQD3 176 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 TRIM9Q9C026 710 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 CYP4F11Q9HBI6 524 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 AFF4Q9UHB7 1163 aaKnown RBP20.41■□□□□ 0.86
COMMD1-207ENST00000471704 ZDHHC9Q9Y397 364 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 INSL5Q9Y5Q6 135 aa20.41■□□□□ 0.86
COMMD1-207ENST00000471704 ANO9A1A5B4 782 aa20.4■□□□□ 0.86
COMMD1-207ENST00000471704 ECI2O75521 394 aa20.4■□□□□ 0.86
COMMD1-207ENST00000471704 PRPF6O94906 941 aaKnown RBP20.4■□□□□ 0.86
COMMD1-207ENST00000471704 VNN2O95498 520 aa20.4■□□□□ 0.86
COMMD1-207ENST00000471704 DCNP07585 359 aaKnown RBP20.4■□□□□ 0.86
COMMD1-207ENST00000471704 PDIA4P13667 645 aaKnown RBP20.4■□□□□ 0.86
COMMD1-207ENST00000471704 GLULP15104 373 aa20.4■□□□□ 0.86
COMMD1-207ENST00000471704 RFX1P22670 979 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms