RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 BIRC3Q13489 604 aa18.76■□□□□ 0.59
HSPG2-208ENST00000471322 IFI16Q16666 785 aaKnown RBP18.76■□□□□ 0.59
HSPG2-208ENST00000471322 ZNF568Q3ZCX4 644 aa18.76■□□□□ 0.59
HSPG2-208ENST00000471322 ZNF710Q8N1W2 664 aa18.76■□□□□ 0.59
HSPG2-208ENST00000471322 SLC30A5Q8TAD4 765 aa18.76■□□□□ 0.59
HSPG2-208ENST00000471322 SLC9A7Q96T83 725 aa18.76■□□□□ 0.59
HSPG2-208ENST00000471322 ADAM2Q99965 735 aa18.76■□□□□ 0.59
HSPG2-208ENST00000471322 ZBED2Q9BTP6 218 aa18.76■□□□□ 0.59
HSPG2-208ENST00000471322 NENFQ9UMX5 172 aa18.76■□□□□ 0.59
HSPG2-208ENST00000471322 YBX2Q9Y2T7 364 aaKnown RBP18.76■□□□□ 0.59
HSPG2-208ENST00000471322 JRKLQ9Y4A0 524 aa18.76■□□□□ 0.59
HSPG2-208ENST00000471322 DDX3XO00571 662 aaKnown RBP eCLIP18.75■□□□□ 0.59
HSPG2-208ENST00000471322 EFCAB14O75071 495 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 LRRN2O75325 713 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 HLA-DRAP01903 254 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 AMHP03971 560 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 PNMA6AP0CW24 399 aaPredicted RBP18.75■□□□□ 0.59
HSPG2-208ENST00000471322 MCF2P10911 925 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 PIK3CAP42336 1068 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 TUBB4BP68371 445 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 SMAD3P84022 425 aaKnown RBP18.75■□□□□ 0.59
HSPG2-208ENST00000471322 PCBP1Q15365 356 aaKnown RBP eCLIP18.75■□□□□ 0.591e-16■■□□□ 14.3
HSPG2-208ENST00000471322 ZBTB41Q5SVQ8 909 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 Q7L0L9 218 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 KREMEN1Q96MU8 473 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 AGPAT1Q99943 283 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 SYT11Q9BT88 431 aa18.75■□□□□ 0.59
HSPG2-208ENST00000471322 PTPRSQ13332 1948 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 PHACTR2O75167 634 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 IL18RAPO95256 599 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 H2AFZP0C0S5 128 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 WHAMMP3Q1A5X7 153 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 DUOXA2Q1HG44 320 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 TDRD10Q5VZ19 366 aaKnown RBP18.74■□□□□ 0.59
HSPG2-208ENST00000471322 PAPD7Q5XG87 772 aaKnown RBP18.74■□□□□ 0.59
HSPG2-208ENST00000471322 H2AFVQ71UI9 128 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 APBB1IPQ7Z5R6 666 aaPredicted RBP18.74■□□□□ 0.59
HSPG2-208ENST00000471322 CEP112Q8N8E3 955 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 TLL1O43897 1013 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 USP8P40818 1118 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 NAP1L1P55209 391 aaKnown RBP18.74■□□□□ 0.59
HSPG2-208ENST00000471322 NCBP1Q09161 790 aaKnown RBP18.74■□□□□ 0.59
HSPG2-208ENST00000471322 AMHR2Q16671 573 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 CATSPER4Q7RTX7 472 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 PHOSPHO2Q8TCD6 241 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 FTHL17Q9BXU8 183 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 NKX2-4Q9H2Z4 354 aa18.74■□□□□ 0.59
HSPG2-208ENST00000471322 REV3LO60673 3130 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 A0A0A6YYK5 440 aaPredicted RBP18.73■□□□□ 0.59
HSPG2-208ENST00000471322 LCHNA4D1U4 455 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 B4GALT5O43286 388 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 GJB5O95377 273 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 MOCS3O95396 460 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 CA3P07451 260 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 CLTAP09496 248 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 TBXAS1P24557 533 aaPredicted RBP18.73■□□□□ 0.59
HSPG2-208ENST00000471322 WNT7BP56706 349 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 BPIFB4P59827 614 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 GLYCTKQ8IVS8 523 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 TATDN2Q93075 761 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 TIFAQ96CG3 184 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 CARD6Q9BX69 1037 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 IMPG2Q9BZV3 1241 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 CDT1Q9H211 546 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 TSPYL2Q9H2G4 693 aaPredicted RBP18.73■□□□□ 0.59
HSPG2-208ENST00000471322 RPF1Q9H9Y2 349 aaKnown RBP18.73■□□□□ 0.59
HSPG2-208ENST00000471322 MSRAQ9UJ68 235 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 PIN4Q9Y237 131 aaKnown RBP18.73■□□□□ 0.59
HSPG2-208ENST00000471322 SAR1BQ9Y6B6 198 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 GBF1Q92538 1859 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 TRANK1O15050 2925 aa18.73■□□□□ 0.59
HSPG2-208ENST00000471322 EFCAB8A8MWE9 144 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 ERLIN2O94905 339 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 ARHGEF15O94989 841 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 PRLRP16471 622 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 TNFSF9P41273 254 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 AMPD2Q01433 879 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 NCOA4Q13772 614 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 EEF1DP3Q658K8 133 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 LMBRD2Q68DH5 695 aaPredicted RBP18.72■□□□□ 0.59
HSPG2-208ENST00000471322 TRAPPC11Q7Z392 1133 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 THNSL1Q8IYQ7 743 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 KAT5Q92993 513 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 TOP1MTQ969P6 601 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 CALR3Q96L12 384 aaKnown RBP18.72■□□□□ 0.59
HSPG2-208ENST00000471322 XIRP2A4UGR9 3374 aa18.72■□□□□ 0.59
HSPG2-208ENST00000471322 VNN1O95497 513 aa18.71■□□□□ 0.59
HSPG2-208ENST00000471322 ZSCAN20P17040 1043 aaPredicted RBP18.71■□□□□ 0.59
HSPG2-208ENST00000471322 SEZ6Q53EL9 994 aa18.71■□□□□ 0.59
HSPG2-208ENST00000471322 SPRED2Q7Z698 418 aa18.71■□□□□ 0.59
HSPG2-208ENST00000471322 RNF169Q8NCN4 708 aa18.71■□□□□ 0.59
HSPG2-208ENST00000471322 LNX1Q8TBB1 728 aaPredicted RBP18.71■□□□□ 0.59
HSPG2-208ENST00000471322 PTPRJQ12913 1337 aa18.71■□□□□ 0.59
HSPG2-208ENST00000471322 CYP26A1O43174 497 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 TNNC2P02585 160 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 GZMAP12544 262 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 DSC3Q14574 896 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 OR5B17Q8NGF7 314 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 UBXN4Q92575 508 aa18.71■□□□□ 0.58
HSPG2-208ENST00000471322 FAM212AQ96EL1 285 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms