RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CPSF4O95639 269 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 PLCG1P19174 1290 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 JAK1P23458 1154 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 IL12RB1P42701 662 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 GCLMP48507 274 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CDH6P55285 790 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CAMK1Q14012 370 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CYP51A1Q16850 503 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 AASDHQ4L235 1098 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 SPATA21Q7Z572 469 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CYP4Z1Q86W10 505 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 ATPAF2Q8N5M1 289 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CNKSR1Q969H4 720 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CMTM5Q96DZ9 223 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 NDST4Q9H3R1 872 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 TMCC3Q9ULS5 477 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 ADCY9O60503 1353 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 LRRC14BA6NHZ5 514 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CHURC1-FNTBB4DL54 471 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 VAMP4O75379 141 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 SNUPNO95149 360 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 ENO2P09104 434 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 YWHABP31946 246 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 RGS2P41220 211 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 ACTR2P61160 394 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CDK17Q00537 523 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 TWF1Q12792 350 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 RC3H1Q5TC82 1133 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 PEG10Q86TG7 708 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 NT5DC4Q86YG4 428 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 GLYCTKQ8IVS8 523 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 PIGOQ8TEQ8 1089 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 HDAC6Q9UBN7 1215 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CCDC188H7C350 402 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 ERN1O75460 977 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 PSMA4P25789 261 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 MAPK9P45984 424 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 ALCAMQ13740 583 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 LPIN1Q14693 890 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 DNAL1Q4LDG9 190 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 PDZK1Q5T2W1 519 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 THUMPD3Q9BV44 507 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 ANAPC2Q9UJX6 822 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 SLC39A10Q9ULF5 831 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 A0A1W2PRG6 482 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 C3orf70A6NLC5 250 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 TPST1O60507 370 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CLTBP09497 229 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 TNNI3P19429 210 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 TPP2P29144 1249 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 SARSP49591 514 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 HSD17B4P51659 736 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 EIF3EP60228 445 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 DPCR1Q3MIW9 517 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 ZNF746Q6NUN9 644 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 FBXO42Q6P3S6 717 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 R3HCC1LQ7Z5L2 792 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CLYBLQ8N0X4 340 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 PABPC5Q96DU9 382 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 DBNDD1Q9H9R9 158 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 WWOXQ9NZC7 414 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 MORC2Q9Y6X9 1032 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 ESYT3A0FGR9 886 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 IL6P05231 212 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CHRM3P20309 590 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 IRX1P78414 480 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 MTFR1Q15390 333 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 GPATCH4Q5T3I0 446 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 SRLQ86TD4 932 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 CYP4Z2PQ8N1L4 340 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 MMGT1Q8N4V1 131 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 XPO6Q96QU8 1125 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 PACSIN1Q9BY11 444 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 TRABDQ9H4I3 376 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 NOL6Q9H6R4 1146 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 SCUBE2Q9NQ36 999 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 ZBTB40Q9NUA8 1239 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 RIC8BQ9NVN3 520 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 HERC5Q9UII4 1024 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 SYNPO2Q9UMS6 1093 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 SH3BP1Q9Y3L3 701 aa7.2□□□□□ -1.26
BRCA1-210ENST00000471181 SRPRBQ9Y5M8 271 aaKnown RBP7.2□□□□□ -1.26
BRCA1-210ENST00000471181 AGRPO00253 132 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 ZBTB39O15060 712 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 SLC16A4O15374 487 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 ASNA1O43681 348 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 PCNAP12004 261 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 LBPP18428 481 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 NOS3P29474 1203 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 PTPN7P35236 360 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 POU4F1Q01851 419 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 PTH1RQ03431 593 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 TAF5Q15542 800 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 MAPK6Q16659 721 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 GATAD2AQ86YP4 633 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 RDM1Q8NG50 284 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 KCNK16Q96T55 309 aa7.19□□□□□ -1.26
BRCA1-210ENST00000471181 SEPT5Q99719 369 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-210ENST00000471181 SLC35C2Q9NQQ7 365 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms