RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NCDNQ9UBB6 729 aa9.9□□□□□ -0.82
SF3A1-206ENST00000471037 MRPS17Q9Y2R5 130 aaKnown RBP9.9□□□□□ -0.82
SF3A1-206ENST00000471037 WDR87Q6ZQQ6 2873 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 I3L4J1 428 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 K7ERI5 159 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 POLR2DO15514 142 aaKnown RBP9.89□□□□□ -0.83
SF3A1-206ENST00000471037 ZNF202O95125 648 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 ATF2P15336 505 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 SDHBP21912 280 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 CDC25AP30304 524 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 CCT6AP40227 531 aaKnown RBP9.89□□□□□ -0.83
SF3A1-206ENST00000471037 STAT6P42226 847 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 YARSP54577 528 aaKnown RBP9.89□□□□□ -0.83
SF3A1-206ENST00000471037 ADCY1Q08828 1119 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 KARSQ15046 597 aaKnown RBP9.89□□□□□ -0.83
SF3A1-206ENST00000471037 ECM1Q16610 540 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 RSPO4Q2I0M5 234 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-206ENST00000471037 HYIQ5T013 277 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 RRAGBQ5VZM2 374 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 TPGS2Q68CL5 300 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 TANGO2Q6ICL3 276 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 ZNF687Q8N1G0 1237 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 CEP120Q8N960 986 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 IER2Q9BTL4 223 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 CCDC94Q9BW85 323 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-206ENST00000471037 CDT1Q9H211 546 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 BHMT2Q9H2M3 363 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 CUEDC2Q9H467 287 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 MAGEF1Q9HAY2 307 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 TRPV5Q9NQA5 729 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 HEBP1Q9NRV9 189 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 STK17AQ9UEE5 414 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 SMG5Q9UPR3 1016 aaKnown RBP9.89□□□□□ -0.83
SF3A1-206ENST00000471037 COL4A2P08572 1712 aa9.89□□□□□ -0.83
SF3A1-206ENST00000471037 FRYLO94915 3013 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 A0A087X0B3 334 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 H7C4K7 107 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 PODXLO00592 558 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 MAN2B1O00754 1011 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 ABLIM1O14639 778 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 PRRG1O14668 218 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 ZNF197O14709 1029 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 TDGF1P13385 188 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 KCNE1P15382 129 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 PROZP22891 400 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 ELF1P32519 619 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 RPL9P32969 192 aaKnown RBP9.88□□□□□ -0.83
SF3A1-206ENST00000471037 NPTX2P47972 431 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 MTAPQ13126 283 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 MRPL58Q14197 206 aaKnown RBP9.88□□□□□ -0.83
SF3A1-206ENST00000471037 E2F4Q16254 413 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 ZNF568Q3ZCX4 644 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 TMEM119Q4V9L6 283 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 CCDC183Q5T5S1 534 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 TAS1R3Q7RTX0 852 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 ELOA2Q8IYF1 753 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-206ENST00000471037 CEP57L1Q8IYX8 460 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 PDILTQ8N807 584 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 SECISBP2LQ93073 1101 aaKnown RBP9.88□□□□□ -0.83
SF3A1-206ENST00000471037 DHX58Q96C10 678 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 ZMAT2Q96NC0 199 aaKnown RBP9.88□□□□□ -0.83
SF3A1-206ENST00000471037 ASB16Q96NS5 453 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 ACO2Q99798 780 aaKnown RBP9.88□□□□□ -0.83
SF3A1-206ENST00000471037 MRPL4Q9BYD3 311 aaKnown RBP9.88□□□□□ -0.83
SF3A1-206ENST00000471037 NUP62CLQ9H1M0 184 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 CHRDQ9H2X0 955 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 CLSTN2Q9H4D0 955 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 TMEM134Q9H6X4 195 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 ZFP14Q9HCL3 533 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 CNTN3Q9P232 1028 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 ARHGAP28Q9P2N2 729 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 HOOK1Q9UJC3 728 aaKnown RBP9.88□□□□□ -0.83
SF3A1-206ENST00000471037 MAFFQ9ULX9 164 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 INSL5Q9Y5Q6 135 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 NCOR2Q9Y618 2525 aa9.88□□□□□ -0.83
SF3A1-206ENST00000471037 PRR5-ARHGAP8B1AHC4 643 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 ACTN4O43707 911 aaKnown RBP9.87□□□□□ -0.83
SF3A1-206ENST00000471037 SEC24AO95486 1093 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 SLFN14P0C7P3 912 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 MCF2P10911 925 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 PLCG1P19174 1290 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 TGM1P22735 817 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 CCR2P41597 374 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 EPHA5P54756 1037 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 ARHGAP8P85298 464 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 LMNB2Q03252 620 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 DMP1Q13316 513 aaPredicted RBP9.87□□□□□ -0.83
SF3A1-206ENST00000471037 ZRSR1Q15695 479 aaKnown RBP9.87□□□□□ -0.83
SF3A1-206ENST00000471037 FAM78AQ5JUQ0 283 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 ZNF280DQ6N043 979 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 CAVIN1Q6NZI2 390 aaKnown RBP9.87□□□□□ -0.83
SF3A1-206ENST00000471037 TSSK4Q6SA08 328 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 KRBA2Q6ZNG9 492 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 PDZD4Q76G19 769 aaPredicted RBP9.87□□□□□ -0.83
SF3A1-206ENST00000471037 MAP4K3Q8IVH8 894 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 DAW1Q8N136 415 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 LEMD2Q8NC56 503 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 SMARCD2Q92925 531 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 IRF7Q92985 503 aa9.87□□□□□ -0.83
SF3A1-206ENST00000471037 TCEAL4Q96EI5 215 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms